Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5227 |
Symbol | |
ID | 4094785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 2522057 |
End bp | 2523205 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638018508 |
Product | porin |
Protein accession | YP_625074 |
Protein GI | 107027563 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0143813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGACGA AGACAAGGAA CGGCCTGCTG GCCGCCGGCG CGTGCTGCGC ACTCGCCGCG CCGGGCGCGC ACGCGCAGTC GAGCGTGACG CTGTACGGGA TCATCGATAC GGGCGTCGAA TTCGTGTCGC ACGCGAACGC GGCCGGCGAT CACGTGGTGC GGATGCCGGG CGTGACGGGC GAGCTGCCGT CGCGCTGGGG GCTGCGCGGC ACCGAGGATC TCGGCGGCGG CTATCAGGCG GTGTTTACGC TCGAAAGCGG CTTCAACGTG CGCGGCGGCG ATCTCGGGCA GGGCGGCCGG CTGTTCGGGC GGCAGGCGTT CGTCGGGCTG AAGAGCGGCT TCGGCACGCT CGCGTTCGGC CGCCAGTACA CGATGACGTA CCTCGCGCTG CAGGGCGCGG ACATCATCGG CCCCGACATC TACGGGCTCG GCTCGTTTGA CGCGTACGTG CCGAACGGCC GTGCCGACAA CGCGGTGACC TACCTCGGCA CGTATCGCGG CGTGACGCTC GGCGCCGCCT ATTCGTTCGG CCGCGACGGC GCGGGCACCG GCAATTCGCC GGGGCAGGGC ACGTGCGCGG GGCAGGTGCC GGGCGACGCG GTGCAGTGCC GCAACTGGTC GGTGATGCTC AAGTACGACA GCGCGTACTT CGGTGCGGCG GCGTCGTACG AGGAACAGCG CGGCGGCACC GGCGCGGCCG CCAACTTCTT CGACGGCGTG GCGCCCGTTC CCTTTACCAG CAGCGGCGGC AAGGATGCGC GCACGCACGT GAGCGCGTAT GCGCAGGCGG CCGGCGCGAA GATCGGCGCG GGCTGGATCG GGCGGCGCGT GTCGACCGGC TCGCCGGCCG CGGCGGGCGC GCATTCCGAC CTGTTCTTCG TCGGCGCGTC GTATGCGGTG AAGCCCGATT TCATCGTCGA CGGCGAAGGC TACCGGATCG TCAACAGCGC GCACGACACG CGCGCGACGA TGGCCACGCT GCGCGCGACC TATCTGCTGA CCAAGCGCAC GGCCGTCTAC GCGCAATCGT CGTATCTGTG GAACAGCGAG CATGCACGCT ATTCGGTCAG CGGCGGCGGG CCCGGCACGA CACCCGGCGC GGGGATGGGG CAGCTCGGCG CGATGGTCGG CATGCGGCAC ATGTTCTGA
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Protein sequence | MKTKTRNGLL AAGACCALAA PGAHAQSSVT LYGIIDTGVE FVSHANAAGD HVVRMPGVTG ELPSRWGLRG TEDLGGGYQA VFTLESGFNV RGGDLGQGGR LFGRQAFVGL KSGFGTLAFG RQYTMTYLAL QGADIIGPDI YGLGSFDAYV PNGRADNAVT YLGTYRGVTL GAAYSFGRDG AGTGNSPGQG TCAGQVPGDA VQCRNWSVML KYDSAYFGAA ASYEEQRGGT GAAANFFDGV APVPFTSSGG KDARTHVSAY AQAAGAKIGA GWIGRRVSTG SPAAAGAHSD LFFVGASYAV KPDFIVDGEG YRIVNSAHDT RATMATLRAT YLLTKRTAVY AQSSYLWNSE HARYSVSGGG PGTTPGAGMG QLGAMVGMRH MF
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