Gene Bcen_5218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5218 
Symbol 
ID4094776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand+ 
Start bp2510797 
End bp2511810 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content68% 
IMG OID638018499 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_625065 
Protein GI107027554 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.655729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGCA CGACTCACAC GATCCGTCGA CACACCCTGC GCGCGCTGCT GGCCGCGCTT 
TGCATCGCGC CGCTCGGGAT GACGGGCGCC GCGCACGCCG ACGCGCCGCT GAAGATCGGC 
TTCCTCGTGA AGATGCCCGA GCAGGCGTGG TTCATCAACG AGCAGAACGC CGCGTCCGCG 
CTCGGCCAGA AGGAGAACTT CTCGGTCGTG AAGATCGGCA CGCCGGACGG CGAGAAGGTG 
CTGGCCGCGA TCGACAACCT CGGCTCGCAA GGCGCGCAGG GCTTCGTGAT CTGCGCGCCG 
GACGTGCGTC TCGGGCCGGC GATCGCATCG CGCGCGAAGC GCTACAACAT GAAGTTCGTG 
ACGGTCGACG ACCAGCTCGT CGATTCGAGC GGCAAGCCGC TGCCGAACGT GCCGCACCTC 
GGGATGTCGG CGACCAAGAT CGGCAACCAG GTCGGCCAGG CGATCTCCGA CGAGATGAAG 
CGGCGCGGCT GGAAGCCGGA GGAAGTCGGC GCGCTGCGCA TCACCAACTA CGAGCTGCCG 
ACCGCGAAGC TGCGCACCGA CGGCGCGACG CAGGCGCTGC TCGCGAACGG CTTCCGCAAG 
GAGAACATCT TCGACGCGCC GCAGAAGACG ACCGACGACG AAGGCGGCTT CAGCGCGGCG 
GCACCGGTGC TCGCGCGCCA TCCGAACGTG AAGAAATGGG TGATCTACGC GCTGAACGAG 
GAAACCGTGC TCGGCGCGGT GCGCGCGACC GAACAGCTGC ACATCCCGGC GGCCGATGTG 
ATCGGCGTCG GCATCAACGG CGCGGGCGAG GCGTTCGCCG AATTCCAGAA GAAGGAGCCG 
ACCGGCTTCT ACGGGACGAT CGCGGTCAGC TCGACGAACC ACGGCAAGGA CAGCACGCAG 
AACCTCGTCG ACTGGATTCG CAACGGCAAG ACGCCGCCGG CCGACACGCA GACGAGCGGC 
AAGCTGATGA CGCGCGCGAA CTGGCAGGCC GTGCGCGCCG AACTCGGTAT CTGA
 
Protein sequence
MNRTTHTIRR HTLRALLAAL CIAPLGMTGA AHADAPLKIG FLVKMPEQAW FINEQNAASA 
LGQKENFSVV KIGTPDGEKV LAAIDNLGSQ GAQGFVICAP DVRLGPAIAS RAKRYNMKFV 
TVDDQLVDSS GKPLPNVPHL GMSATKIGNQ VGQAISDEMK RRGWKPEEVG ALRITNYELP 
TAKLRTDGAT QALLANGFRK ENIFDAPQKT TDDEGGFSAA APVLARHPNV KKWVIYALNE 
ETVLGAVRAT EQLHIPAADV IGVGINGAGE AFAEFQKKEP TGFYGTIAVS STNHGKDSTQ 
NLVDWIRNGK TPPADTQTSG KLMTRANWQA VRAELGI