Gene Bcen_5216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5216 
Symbol 
ID4094774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2508819 
End bp2509748 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content69% 
IMG OID638018497 
Productdihydrodipicolinate synthetase 
Protein accessionYP_625063 
Protein GI107027552 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCGA GCAGCACGCC GCGCCATCGC GGCATTTTTC CCGTCGTTCC GACGACGTTT 
ACCGACACCG GCGAGCTCGA CCTCGCGAGC CAGAAGCGCG CGGTCGATTT CATGATCGAC
GCCGGCTCGG ACGGGCTGTG CATCCTCGCG AACTTCTCCG AGCAGTTCGC GATCACCGAC
GACGAACGCG ACGTGCTCAC GCGCACGATC CTCGAGCACG TGGCCGGCCG GGTGCCGGTG
ATCGTCACGA CGTCGCACTA CAGCACGCAG GTGTGCGCGG CGCGCAGCCT GCGCGCGCAG
CAGCTCGGCG CGGCGATGGT GATGGCGATG CCGCCGTACC ACGGCGCGAC GTTCCGCGTG
CCCGAAGCGC AGATCTTCGA TTTCTTCGCG CGCGTGTCGG ATGCGATCGA CATCCCGATC
ATGATTCAGG ATGCGCCCGC GAGCGGCACC GCGTTGTCCG CGCCGTTCCT CGCGCGGATG
GCTCGCGAGA TCGAGCAGGT CGCGTACTTC AAGATCGAGA CGCCGGGCGC CGCGAACAAG
CTGCGCGAAC TGATCCGGCT CGGCGGCGAC GCGATCGAGG GGCCGTGGGA CGGCGAGGAG
GCGATCACGC TGCTCGCCGA TCTCCATGCG GGCGCGACCG GCGCGATGAC GGGCGGCGGC
TTCCCGGACG GCATCCGGCC GATCCTCGAA GCATTCCGCG AAGGGCGGCA CGACGATGCG
TTCGCGCATT ACCAGGCATG GCTGCCGCTG ATCAATCACG AGAACCGCCA GTCCGGGATC
CTCACCGCGA AGGCGCTGAT GCGCGAAGGC GGCGTGATCG CGTGCGAGCG GCCGCGGCAT
CCGATGCCGG AACTGCACCC GGACACGCGC GCGGAATTGC TCGCGATCGC GCGCCGGCTC
GATCCGCTCG TGCTGCGCTG GGCGCGCTGA
 
Protein sequence
MTSSSTPRHR GIFPVVPTTF TDTGELDLAS QKRAVDFMID AGSDGLCILA NFSEQFAITD 
DERDVLTRTI LEHVAGRVPV IVTTSHYSTQ VCAARSLRAQ QLGAAMVMAM PPYHGATFRV
PEAQIFDFFA RVSDAIDIPI MIQDAPASGT ALSAPFLARM AREIEQVAYF KIETPGAANK
LRELIRLGGD AIEGPWDGEE AITLLADLHA GATGAMTGGG FPDGIRPILE AFREGRHDDA
FAHYQAWLPL INHENRQSGI LTAKALMREG GVIACERPRH PMPELHPDTR AELLAIARRL
DPLVLRWAR