| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5178 |
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| Symbol | |
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| ID | 4095205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008061 |
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| Strand | + |
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| Start bp | 2462282 |
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| End bp | 2463142 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638018459 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_625025 |
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| Protein GI | 107027514 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGCTCG TCTTGGCCGT TTCCCATTCC GTCGTGGACG AACAAGAAAC CGACGCCGCT
GCCGTCACAT CGGGCAGTTC TTTCTATCTG GCGATGCGCA TCCTGCCGGC CGTGCAGCGC
GATGCGATGT TCCAGGTCTA CGCGTTTTGC CGCGCGGTCG ACGACATCGC CGACAGCGAC
CTGCCGCGCG CCGAGCGCAA CGCGGGCTTG AATCGCTGGC GCGCGGACAT CGACGCCTGC
TTCGCCGGTC GGCCGCCGCG CCACCTGGTC GCGCTCGATC GCGAGATCCG CGCGTTCAAC
CTGCAGCGCG ACGATTTCCA CGCGATGATC GACGGAATGG CGATGGACGC GGCCGAAGAT
ATCTGCGCGC CCGACGAGCC GACGCTCGAC CTCTTCTGCG ATCGCGTGGC GAGCGCGGCC
GGCCGGCTAT CGGTGAGGAT CTTCGGGATG CCGGAAGCCG AAGGGATCGC GCTGTCGCAC
CACCTGGGCC GCGCGCTGCA ACTGACGAAC ATCCTGCGCG ACATCGACGA CGACGCGGCG
ATCAACCGGT GCTACCTGCC GCGCGAGCTG CTCGCGCGCG AAGGCATCGC GATCACCGAT
CCGGCGACGA TCGTGCGCGA TCCGGCGCTG CCGCGCGTGT GCGCGACGCT CGTCGAGCGC
GCGCTCGAGC ACTTCTGCCA GGCCGATGCG GTGATGGACA CCTGCCCGCG TGCGCAGGTG
AAGGCGCCGC GCATCATGTC GGGCGCGTAT CGCTGCATTC TCGAGGCCGC GATCGCACGC
GGCTTTGCCG CGCCGCGCGC GCCGCTGCGC AAGCCGAAGG CGCGCATGCT GATGATCGCC
GCGCGCTACG CGCTGTTCTG A
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| Protein sequence | MELVLAVSHS VVDEQETDAA AVTSGSSFYL AMRILPAVQR DAMFQVYAFC RAVDDIADSD
LPRAERNAGL NRWRADIDAC FAGRPPRHLV ALDREIRAFN LQRDDFHAMI DGMAMDAAED
ICAPDEPTLD LFCDRVASAA GRLSVRIFGM PEAEGIALSH HLGRALQLTN ILRDIDDDAA
INRCYLPREL LAREGIAITD PATIVRDPAL PRVCATLVER ALEHFCQADA VMDTCPRAQV
KAPRIMSGAY RCILEAAIAR GFAAPRAPLR KPKARMLMIA ARYALF
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