Gene Bcen_5176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5176 
Symbol 
ID4095203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2460629 
End bp2461564 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content70% 
IMG OID638018457 
Productalpha/beta hydrolase fold 
Protein accessionYP_625023 
Protein GI107027512 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCCG GTTCGTCTAA GATGACACCT TTCTCGAAAA ATACGGACAC CATGGAGACG 
AACGACAACG CCACCCCGCA GTCCGATCAT CCCGTTTTCG TGCTCGTGCA CGGCGCGTGG
CATGGCGCGT GGTGCTACGC CCACGTGGCG GCCGCGCTGG CCGCGCGCGG CTACCTGTCG
ATCGCGCGCG ACCTGCCCGC GCACGGCATC CATGCGCGCT TTCCCGCGTC GTACCTCGCC
CGGCCGCTCG ACAAGGACGC GTTCGGCGCC GAGCCGTCGC CGGTCGCGAA CACGACGCTC
GACGACTACG CGACGCAGGT GATGCAGGCC GTCGACGACG CGTACGCGCT CGGCCGCGGC
AAGGTCGTGC TGGTCGGGCA CAGCATGGGC GGCCTCGCGA TCACGGCGGC AGCCGAACGT
GCGCCGGAAA AGATCGCGAA GATCGTCTAT CTCGCGGCCT TCATGCCCGC GTCGGGCGTG
CCGGGCCTCG ACTACGTGCG CGCGCCGGAA AACAAGGGCG AGCTGCTCGG CCCGCTGATG
CTCGCGAGCC CGCGCGTGGC CGGTGCGCTG CGCGTCGATC CGCACAGCGG CGATGCCGCG
TATCGCGAAC TGATGAAGCG CGCGCTGTAC GAAGACGTGC CGCAGGCCGA CTTCGATGCG
GTCGCGAACC TGATGAGCTG CGACGTGCCG GCCGCGCCGT TCGCGACCGC GATCCCGACG
ACCGCCGCCC GCTGGGGTGC GATCGACCGT CACTACGTCA AGTGCCTGCA GGATCGCGTG
ATCCTGCCCG CGCTGCAGCA GCGCTTCATC GACGAAGCCG ACGCGTTCGC GCCCGGCAAC
CCGACCCACG TGCACCAGCT CGACAGCAGC CATTCGCCGT TCGTGTCGCA GCCGGCCGTG
CTGGCCGGCG TGCTCGCCGA CATCGCGAAA AGCTGA
 
Protein sequence
MAAGSSKMTP FSKNTDTMET NDNATPQSDH PVFVLVHGAW HGAWCYAHVA AALAARGYLS 
IARDLPAHGI HARFPASYLA RPLDKDAFGA EPSPVANTTL DDYATQVMQA VDDAYALGRG
KVVLVGHSMG GLAITAAAER APEKIAKIVY LAAFMPASGV PGLDYVRAPE NKGELLGPLM
LASPRVAGAL RVDPHSGDAA YRELMKRALY EDVPQADFDA VANLMSCDVP AAPFATAIPT
TAARWGAIDR HYVKCLQDRV ILPALQQRFI DEADAFAPGN PTHVHQLDSS HSPFVSQPAV
LAGVLADIAK S