| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5161 |
|---|
| Symbol | |
|---|
| ID | 4095109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | + |
|---|
| Start bp | 2445323 |
|---|
| End bp | 2446342 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638018442 |
|---|
| Product | phage integrase |
|---|
| Protein accession | YP_625008 |
|---|
| Protein GI | 107027497 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTTC CCGCCTCTCC CGACACCGCC GCCCCACCGG AAGAAAAGGA CCTGTTCGAC
CGCGATGCGT CCGACTGGGT TCTTTCGCCC GAAGCCGCGT TCGACGCATG GCTGGCAATG
CAGGACTATC GCCGCTCGTC GGCCGATGTC TATCGCGCGC AATGGGGCGC GTTTCTCGCA
TGGATGCGCG CGCATCAAAA GAACCTGGCG ACGGTCGATA CACCGACCAT CGCGAACTTC
GTCGGCGAGT TGCCGATCAA GAAAACGCAG CGAATGCGCT ATCTGCGGCT GATCGAGCGC
GTGCTCGATC ATATTCGCCG CACCGAATAT GCATCGACCA ATCCGGCCCG CTTCATTGCT
CAGGATGGCG AAGCGACTTG GCGCAAGGCC CGCGACAACG AACCGACCGG CTTCCTCACG
CCGGCGGAAC GCGCGACGTT GCTCGCGTAT CTGTTTTCGC CGATCGGCGT GTCGGGTTCC
GCGTACTGGA AGGAGCGTCG CGACCGCGCA CTCGTCGCTG CATTTCTCGG CGCCGGCATC
AAAACCGGCG AAGCGCGCGC GCTTACGATT AGTTGCATCA ATACGAGCAA CACGTCGCTG
CGGATCGAAT CGACGCATCC GGATTACGCA CGCGAAACTC ATCTGGCCTC ATTCGCGATC
GCGTTGCTGG AAGCCTGGCT CACCGAACGC AAACGCCAGG AGATTCCGGG GGAGCTCGTC
TTCCCCGCGT CGCACGCCGG ACGGCCGATG CACAAGGCGA CGATGCTGCG CGCGATCGAC
GCGATCGTCG AATCGGCCGG GCTCACGTCG TCGCGCACTG CACGCACCAG CCCGCAAACC
TTGCGCAATA CCTACGCGGC GGAACTGTTC GAGCATGACG TGCCGCCCGA GCGGGTCGGC
AAATGGCTGG GCTTCATGCG GCCGATCTCG TCGAATCGCC TGCATCGCGC GTGGAAAAAC
TGGCGCGACG GGCTGGCCGA CAGCAACGGT GACGCGTCCG ACCGCGACGA AACTCACTGA
|
|---|
| Protein sequence | MSLPASPDTA APPEEKDLFD RDASDWVLSP EAAFDAWLAM QDYRRSSADV YRAQWGAFLA
WMRAHQKNLA TVDTPTIANF VGELPIKKTQ RMRYLRLIER VLDHIRRTEY ASTNPARFIA
QDGEATWRKA RDNEPTGFLT PAERATLLAY LFSPIGVSGS AYWKERRDRA LVAAFLGAGI
KTGEARALTI SCINTSNTSL RIESTHPDYA RETHLASFAI ALLEAWLTER KRQEIPGELV
FPASHAGRPM HKATMLRAID AIVESAGLTS SRTARTSPQT LRNTYAAELF EHDVPPERVG
KWLGFMRPIS SNRLHRAWKN WRDGLADSNG DASDRDETH
|
|---|
| |