| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5149 |
|---|
| Symbol | |
|---|
| ID | 4096304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 2435369 |
|---|
| End bp | 2436253 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638018430 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_624996 |
|---|
| Protein GI | 107027485 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGAGA TCAGTCTGGA CCGTCTGCGT ACGCTGGTCG CGATCGCGGA CCAGGGTTCC
TTCGTGGCGG CGGCGCAATG GCTTCATCTC GCGCCGCCGA CCGTCAGCCT GCATGTCGCC
GAGCTGGAAA GCCGCGTCGG CGCGCCGCTG CTGTCGCGCA CGCGCGGCAA CGTGCGCCCG
TCGGTGATCG GTGAAGTGCT GGTGGAGCGG GCGCGGCGTC TGCTGGCGGA AGTCGAATCG
ACGCTGGACG ACGTGCAGCG ACAGGTGCAG GGGTTGACCG GGCGCGTGCG TCTCGGCGCG
TCGACCGGCG CGATCGCGCA TCTGCTGCCG CAGGCGGTGG CTGGACTGCG CGCGCAGCAT
CCGGATATCG ACGTGCAGAT CGCGGTGCTC ACGTCGCAGG ACACGCTGGC GCGCATTGCA
CAGGGCACGC TCGACGTCGG GCTGGTCGCG CTGCCGCAAG CGCCGGTCGC GGGGCTGTCG
ATCCGCTCGT GGCGCCGCGA CCCGGTGATG GCTTTCCTGC CCGCGGACTG GCCGCTTCCG
GCCCGTGTGA CGCCGGCGTA TCTGGCCGCG CGGCCGCTGA TTCTCAACGA TGCGACGACG
CGCCTGTCGC GGCTCACGAC CGAATGGTTC GCGCTCGGCG GCCACCGGCC CGTGCCGCGG
ATCGAACTCA ACTACAACGA TGCGATCAAG AGCCTGGTCG CCGCGGGGTA CGGCGCGACG
CTGCTGCCGC ACGAGGCGGG CGCCCCGCTG CCGGATGCGC GCATCGTCAT GCGGCCGCTA
CGTCCGGCGC TGTGGCGTGA GCTGGGGATC GCCCATCGGG CCGGCCCGGT CGAACGGGCC
ACGCAGCACG TGCTCGATGC GCTGCGGGCG CTCGGCGCGC GATAG
|
|---|
| Protein sequence | MREISLDRLR TLVAIADQGS FVAAAQWLHL APPTVSLHVA ELESRVGAPL LSRTRGNVRP
SVIGEVLVER ARRLLAEVES TLDDVQRQVQ GLTGRVRLGA STGAIAHLLP QAVAGLRAQH
PDIDVQIAVL TSQDTLARIA QGTLDVGLVA LPQAPVAGLS IRSWRRDPVM AFLPADWPLP
ARVTPAYLAA RPLILNDATT RLSRLTTEWF ALGGHRPVPR IELNYNDAIK SLVAAGYGAT
LLPHEAGAPL PDARIVMRPL RPALWRELGI AHRAGPVERA TQHVLDALRA LGAR
|
|---|
| |