Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5117 |
Symbol | |
ID | 4095124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 2399871 |
End bp | 2400674 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638018398 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_624964 |
Protein GI | 107027453 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0548217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCAGA CGAAGCAAAC GGCGCATGCG CCCGTCGTGC TCGTGACCGG CGCCGCGCGC CGGGCCGGGC GCGCGTTCGC CGAGTATTTC GCCGCGCACG GCTATCGCAC CGCGGTGCAT TACGACCGTT CGGCCGATGC CGCGCAGGCC GCCGCCCGCG CGATTGCCGA ACGCGGGCAC GACGCGGTGG CGCTGCAGGC CGACCTGTCC GATGCCGCGC AGATCACCGC GCTGATCGAT GCAGTCTATG CACGCTTCGG CCGCCTCGAC GTGCTGGTCA ACAACGCGTC GGTGTTCTGG CAGGACCATT TCCCGAGCTT CGATCTCGCC GCGTTCGACC AGGCGTGGGC CGTCAACTGC CGCGCGCCGA TCCTGCTCAC GCGCGCGTTC TACGAGCGGG CCCGCGCGGC CGGCACGCAA GGCGTCGTCG TGAACGTGGT CGACCAGAAG ATCAAGGAAA ACTTCCACCG CGACCATTTC AGCTACACAG TCGCGAAGGC CGCGCTCGGC AATCTCACGC AGATGCTCGC GCTGTCGTCC GCGCCGGTGC TGCGCGTGAA TGCGGTGTTC CCGGGGTTGA TGCTGCCGAG CGACGACCAG ACGCAGGCCG ACTTCGAACA CGCGAGCCGC GCATCGACGC CGCTCGCGCG CATCGCGGGC CCCGACGACG TCGCCAGCGC AATCCTGCTG CTCACGGGCA ATGCGTACAA CGGCGTGGAT TTCGTCGTCG ATGCGGGCCA GAACCTGATC CGCGTCGATC AGGGCGTGCT GTACAAGCAC CGCTCGCCGG ACGGCAAGCA CTGA
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Protein sequence | MEQTKQTAHA PVVLVTGAAR RAGRAFAEYF AAHGYRTAVH YDRSADAAQA AARAIAERGH DAVALQADLS DAAQITALID AVYARFGRLD VLVNNASVFW QDHFPSFDLA AFDQAWAVNC RAPILLTRAF YERARAAGTQ GVVVNVVDQK IKENFHRDHF SYTVAKAALG NLTQMLALSS APVLRVNAVF PGLMLPSDDQ TQADFEHASR ASTPLARIAG PDDVASAILL LTGNAYNGVD FVVDAGQNLI RVDQGVLYKH RSPDGKH
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