Gene Bcen_5109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5109 
Symbol 
ID4095253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand- 
Start bp2392678 
End bp2393067 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content63% 
IMG OID638018390 
Product4-carboxymuconolactone decarboxylase 
Protein accessionYP_624956 
Protein GI107027445 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR02425] 4-carboxymuconolactone decarboxylase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGACC AGGAACGTTA TGAAGCAGGG ATGAAGGTGC GTCGCGCGGT GCTCGGCGAC 
GCGCACGTCG ACCGTTCGAT CGAGAACCGC ACCGAGGTGA CCGACGAATT CCAGAATCTG 
ATCACGCGCT ATGCATGGGG CGAGATCTGG ACCCGCGACG GACTGCCGCG CCATACGCGC 
AGCCTGCTGA CCATCGCGAT GATGGTGGCG CTGAACCGCG GCGAGGAACT GGCGCTGCAC 
CTGCGCGCCG CGCGCAACAA CGGCGTGACG CGCGACGAGA TCAAGGAAGT GCTGCTGCAG 
ACCGCGATCT ATTGCGGCGT GCCGGCCGCG AATTCCGCGT TCCATCTCGC GGACAAGATC 
TTCAAGGAAC AGGATGGTGC TGCTGGTTAA
 
Protein sequence
MDDQERYEAG MKVRRAVLGD AHVDRSIENR TEVTDEFQNL ITRYAWGEIW TRDGLPRHTR 
SLLTIAMMVA LNRGEELALH LRAARNNGVT RDEIKEVLLQ TAIYCGVPAA NSAFHLADKI 
FKEQDGAAG