Gene Bcen_5087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5087 
Symbol 
ID4094242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2372401 
End bp2373180 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content63% 
IMG OID638018368 
ProductTetR family transcriptional regulator 
Protein accessionYP_624934 
Protein GI107027423 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCACGC CGATGCCCAA CACTTCTTCC CGTCGCACCA GAACACCGTC GCCGGCCGTC 
TCGAACGGGC AAGCGCCGTC GAGCCCCGAG GTTCGCGAGC CGCGGGGCGC GCGCCGCAAG
CGCGAGACGC GCGCGCGATT GCTGGATGCC GCCTTTGTAC TCATGGCGCA AAAGGGGATG
GAAGGCGTCG CGATCAATGA AATTACGGAA GCCGCGGACG TGGGTTTCGG GTCGTTCTAC
AACCACTTCG AATCGAAAGA GGCGATTCAT GCCGCGGTTC TGGAAATCGT GTTCGAGGAG
TTCGCGGATA CCCTGGACCG CATCGCAGGC AGCCTCACCG ACCCGGCCGA GATCATTTCC
GTGTCGCTGC GCCATACATT GCTGCGAGCC AGAAGCGAGC CGGTCTGGGG ACAATTTCTC
CTGCGCGAAG GGTTGTCCAT GCGAGCGCTC AGCCGCGGCC TCGGACCGCG GTTGTTGAGG
GATATTCAGA AAGGCATCGT CGCCGGGAGA TTCTCGGCAA GCGACCCGCT GATGAGCGTG
ATTACGGTCG GGGGCGCGGT ACTGACCGCC ATTGCGATCG AGCTCCGATT CGATGCGGAC
GAGAAGCCGG TTACCGACAT GTTGAACATG ATCGGGTACA GTCAGAACGG CTTTGCCGAG
CGTGCAGCTT CATCCCTGTT GCAGACGCTG GGTGTGCCGC GAACTGAAGC GACAGAGATT
GCGAATCGCC CGTTGCCGCC GGCTGTGACG TCTGCGCCCG AGGAGTCGCC GGAGCGCTAG
 
Protein sequence
MRTPMPNTSS RRTRTPSPAV SNGQAPSSPE VREPRGARRK RETRARLLDA AFVLMAQKGM 
EGVAINEITE AADVGFGSFY NHFESKEAIH AAVLEIVFEE FADTLDRIAG SLTDPAEIIS
VSLRHTLLRA RSEPVWGQFL LREGLSMRAL SRGLGPRLLR DIQKGIVAGR FSASDPLMSV
ITVGGAVLTA IAIELRFDAD EKPVTDMLNM IGYSQNGFAE RAASSLLQTL GVPRTEATEI
ANRPLPPAVT SAPEESPER