| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5070 |
|---|
| Symbol | |
|---|
| ID | 4094129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 2351777 |
|---|
| End bp | 2353069 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638018352 |
|---|
| Product | putative integral membrane sensor protein |
|---|
| Protein accession | YP_624918 |
|---|
| Protein GI | 107027407 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3447] Predicted integral membrane sensor domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.520625 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACACCA AACGATCGCG GCCGGGGCTC GTCGCCGCGC TGCTCTGGGC GGCGCTGTAT
CTCGCGACCG GCTACATCTC GCACGAATTC AACGGCCCCG TCCGGCTGAC GGGCTACATC
TGGCTGCCGG CCGGTGTGAC GGTCGGCGCA TTCATGCTGC GACCGATGCG CGAATGGCTG
ACGCTGGCCG GCGCATTCCT GGCCGGGCAG CTCGCGCTGT CCGCGATCGA GCACGGCAGC
TTCGTCAACG CGGTGCTGTT CACGGTGGAC GAGGTCGGCG CGGCCGCACT CGCGGTCTGG
CTCGTGCAGC GCGTGCGCTT CTCGCTCGAA GGGCTGTATT TCCTGCGCTC GGTGATTCTG
GCCGGCTTGA TCGCGGGCGT CGTCGGCGCG ATCGGCGGCG CGGCGTGGTA CACGACGCTC
AAGGGTGCGC CGTTCTTCGA CGTGTGGTCG GTGTGGGCCG CGTCCGATTT CGTTGGCGTG
CTGCTGGTCA CGCCGGTGCT CGCGTCGTGG TCGCGCTTTC GCGCGCACCG CTCGGGCGAC
CACGAGCGCT TCGACCTGGT GCTCGGCATC GTCGCGTTCG CGTTGCTCGC GGTCGTCGCG
CTCGTGATCT TCGATGGCGA TACGGCGCGG AAATTCGGCA CGGGCGCCGG CTTCGCGCTC
ACCTATGTGC CGCTGTTCCT GACGGTCGCG GTGACGCTGC TGCTCGGCGG CCGTGCGGGC
TCGTCGTCGG TGCTGGTGCT CGCGCTGATC GTGATCGAGC AGACCGCGCA GGGCGACGGC
CCGTTCGCGT CGCTCCACGA GCATTACGGC AGTGCGCTGC TCGAAGCGCA GCTCTATCTG
GCGGTCGCGT CGCTGCTGGT GCTGACGGTG AGCACGCTGA AGACGACGCG CGAGCGCGTG
CACGAGCATG CGGCGGTGCT GCAGAACAAC ATGGAGCTCG CGCTCGCGAG CGCCGGCCAG
ATCGCGTACG TGCTCGATCC CGAGTCGGGC CGGATCGAAT GGAGCGGCGA CGTCGAGCGC
GTGTTCGGCG TCGGCGTCGA CGCCGCGCAG ATCGCGAGCG TGCCGCTCGT GCTCGAACGC
GTGCAGGCGG GCGACCGCGA CGCGTTGCGC GACTACTGGA ATGCGGAGAT CGCGGGCGAG
GACCGCGCGT CGCTGTCGCT GCGCATCGTG CTGCGCGACG GCGGCACGCG GACGATCACC
GACCACGGCG CGCCGTTGCT CGATTCGAAC GTCGACGTGA CGGTGGTGGC GGGCGTGTGG
CAGATCGAAC GCGTGTGGCC GGCGGACGAA TGA
|
|---|
| Protein sequence | MDTKRSRPGL VAALLWAALY LATGYISHEF NGPVRLTGYI WLPAGVTVGA FMLRPMREWL
TLAGAFLAGQ LALSAIEHGS FVNAVLFTVD EVGAAALAVW LVQRVRFSLE GLYFLRSVIL
AGLIAGVVGA IGGAAWYTTL KGAPFFDVWS VWAASDFVGV LLVTPVLASW SRFRAHRSGD
HERFDLVLGI VAFALLAVVA LVIFDGDTAR KFGTGAGFAL TYVPLFLTVA VTLLLGGRAG
SSSVLVLALI VIEQTAQGDG PFASLHEHYG SALLEAQLYL AVASLLVLTV STLKTTRERV
HEHAAVLQNN MELALASAGQ IAYVLDPESG RIEWSGDVER VFGVGVDAAQ IASVPLVLER
VQAGDRDALR DYWNAEIAGE DRASLSLRIV LRDGGTRTIT DHGAPLLDSN VDVTVVAGVW
QIERVWPADE
|
|---|
| |