Gene Bcen_5057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5057 
Symbol 
ID4094018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2338219 
End bp2339511 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content68% 
IMG OID638018339 
Productmajor facilitator transporter 
Protein accessionYP_624905 
Protein GI107027394 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.195392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTGC TGAACCCCGC GACCCCGGCA TACGACGCCG GCGAAGCCAT CCCGCGCCGC 
CGCTGGCTGC GCGTGATTCC ACCGCTGCTG CTCGCCTGCA TCATTTCCTA CATGGACCGC
GTGAACATCG CGTTCGCGAT GCCCGGCGGG ATGAACGCCG ATCTCGGCAT GGACGCGACG
ATGGCCGGCC TCGCCGGCGG CATCTTCTTC TTCGGCTACC TGTTCCTGCA GATTCCCGGC
GGCCGGCGCG CGGCACTCGG CAGCGGCAAG GCGTTCATCG CGTGGTCGCT CGTGAGCTGG
GCCGTGCTGT CGGTGCTGAC CGGGCTCGTC ACGCACACGT GGCAGTTGCT GGCGCTGCGC
TTCCTGCTCG GCGTGGCCGA GGGCGGGATG CTGCCCGTCG TGCTCACGAT GGTCAGCCAC
TGGTTTCCCG ATCGCGAACG CGGCCGCGCG AATGCGATGG TCATCCTGTT CGTGCCGCTC
GCCGGCATGA TCACCGCGCC GCTGTCCGGC TTCATCCTCG CCGCGTACGA CTGGCATCAC
CTGTTCTTCT GCGCGGGCGC ACTGTCGCTG CTGTGTCTCG TCGTCTGGAT GCTGTTCGCC
GACGACGGCC CGGAGACCGC GCGCTGGGTA TCGCCGCGCG AGAAGGCCTA CATCCTCGAT
GCGCTGCGCG ACGAGCAGGA ACGCAAGCGC GCGGCCGGCA CGCCGGCGGC CGCATCGTTC
GGCGAACTGC TGCGCCACCC TACGATCTGG CTGCTCATCG CGATCAACTT CTGCTATCAG
GCCGGCATCT ACGGCTATAC GATGTGGTTG CCGACCCTGC TGAAAAACCT CACGCACAGC
GGGATGGGCA GAATCGGCCT GCTCGCGATG CTGCCGTACA TCGCGATGGT GATCGGGATG
CTCGTCACGT CGTATTGGTC CGACCGGACC GGCAAGCGGC GCCTGTTCGT GCTGCTGCCG
CTCGTCGGGT TCGCCGCATG CCTCGCGCTG TCGGTGCACG CGCATGCGTC GATGGCCGTA
TCGTTCGCGT TCCTGATCGG CTGCGGCTTC TTCCTGCAGG CGGCGGCCGG CGTGTTCTGG
GCGATTCCGC CGAAGCTCTG CAGCGTCGAG ACGGCCGGCA GCGCACGCGG CCTGATCAAC
GCGCTCGGCA ATCTCGGCGG CTTCTGCGGC CCGTATGCGG TCGGCGTGCT GACGCAGCAC
GTGAGCGCGG CGGCTGGCGT ATACAGCCTC GCGGTCACGC TCGCGGTGGC CGGCCTGCTC
GCGCTGACGC TGCCGAAGCG CTGCGAGGGC TGA
 
Protein sequence
MNLLNPATPA YDAGEAIPRR RWLRVIPPLL LACIISYMDR VNIAFAMPGG MNADLGMDAT 
MAGLAGGIFF FGYLFLQIPG GRRAALGSGK AFIAWSLVSW AVLSVLTGLV THTWQLLALR
FLLGVAEGGM LPVVLTMVSH WFPDRERGRA NAMVILFVPL AGMITAPLSG FILAAYDWHH
LFFCAGALSL LCLVVWMLFA DDGPETARWV SPREKAYILD ALRDEQERKR AAGTPAAASF
GELLRHPTIW LLIAINFCYQ AGIYGYTMWL PTLLKNLTHS GMGRIGLLAM LPYIAMVIGM
LVTSYWSDRT GKRRLFVLLP LVGFAACLAL SVHAHASMAV SFAFLIGCGF FLQAAAGVFW
AIPPKLCSVE TAGSARGLIN ALGNLGGFCG PYAVGVLTQH VSAAAGVYSL AVTLAVAGLL
ALTLPKRCEG