Gene Bcen_5056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5056 
Symbol 
ID4094017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2337171 
End bp2338088 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content70% 
IMG OID638018338 
Productdihydrodipicolinate synthetase 
Protein accessionYP_624904 
Protein GI107027393 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.309505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCAC GCTACCAGGG CGTCTTTCCC GTCGTGCCGA CGATCTTCGA TGCGCACGGC 
GCGCTCGATC TCGACGGCCA GCGCCGCTGC GTCGATTTCA TGATCGATGC CGGCTCGCAC
GGCCTCTGCA TCCACGCGAA CTATTCCGAG CAATTCGCGC TCGGCGACGA CGAACGCGAT
CTCGTCACAC GCACGACGCT CGAACACGTC GCCGGCCGCG TGCCGGTAAT CGTCACGACG
TCGCACTTCA GCGCGCGGAT CTGCGCGACG CGCAACCGGC AGGCCCAGGC GCTCGGCGCG
GCGATGGTGA TGGTGATGCC GCCGTACCAC GGCGCGACGT TCCGCGTGCC CGAAGCCCAG
GTGCGCGCGT ACTTCCGCGA AGTCGCCGAC GGCCTCGACA TCCCGCTGAT GATCCAGGAC
GCGCCGGCGA GCGGCGTTGC GTTGCCGGCG TCGCTGCTCG CGACGCTCGC ACGCGAGATC
GACGCGGTGT CGTACTTCAA GATCGAGACG GCCGGCGCCG CGTCGAAGCT GCGCGAGCTG
ATCGCGCTCG GCGGCGATGC GATCGAGGGG CCGTGGGACG GCGAGGAAGG CATCACGCTA
CTCGCCGATC TCGACGCCGG CGCGACCGGC GCGATGACGG GCGGCGGCTA TCCGGACGGC
ATTCGCCGGA TCACCGACGC GTATTTCGCC GGGCGCCGCG ACGATGCATG CGACGCGTAC
GCGCGCTGGC TGCCGCTGAT CAACTACGAG AACCGCCAGT CGGGCTTCCT CACCGCGAAG
GCGCTGATGA AGGAAGGCGG CGTGATCGCG TGCGACCGGC CGCGCGCGCC GTGGCCGGAG
TTGCATCCGC AGGTGCGTAC CGGCCTGCTC GATACGGCGC GGCGGCTCGA CCCGATCGTG
CTGCGCTGGG GGCGTTAG
 
Protein sequence
MNARYQGVFP VVPTIFDAHG ALDLDGQRRC VDFMIDAGSH GLCIHANYSE QFALGDDERD 
LVTRTTLEHV AGRVPVIVTT SHFSARICAT RNRQAQALGA AMVMVMPPYH GATFRVPEAQ
VRAYFREVAD GLDIPLMIQD APASGVALPA SLLATLAREI DAVSYFKIET AGAASKLREL
IALGGDAIEG PWDGEEGITL LADLDAGATG AMTGGGYPDG IRRITDAYFA GRRDDACDAY
ARWLPLINYE NRQSGFLTAK ALMKEGGVIA CDRPRAPWPE LHPQVRTGLL DTARRLDPIV
LRWGR