Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5002 |
Symbol | |
ID | 4094255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 2276110 |
End bp | 2277063 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638018284 |
Product | LysR family transcriptional regulator |
Protein accession | YP_624850 |
Protein GI | 107027339 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATTCAC TTATAGGAAA GACCGCGACG TTCCGGCAGT TGAAGGCGCT GGACATGATT GCGCGGCTCG GCAGCGTGTC GCGCGCGGCC GAGGAGCTGA ACCTGACGCA GCCGGCCGTG TCGCTGCAGG TTCGCCTGCT CGAGGAGGCC GTGGGCGCCG CGTTGCTGCA GCGGGTGGGG CGTGGCGTGC AACTGACCGC GGCCGGCGAG ATCGTGGCGC GCTACGCGCG CGAGATCCTG CATCTATGGA GCGAGGCCGG CGACGAAGTG GCCGCGTTGA CGGGCGATCT CGGCGGCACG CTGCGGATCG GCGCGATCAC GACGGCCGAA TACCTGATCC CGCCGCTGCT CGTCAAATTC ACCGCGACGC GCCCGCACGT GAAGACCTAT TTCAAGGTCG GCAACCGCGA CGACATCATC CGCATGCTCG CGACGCATGA AATCGATCTC GCGGTGATGG GCAGCGCGCC GAAGGAACTG CGCACGCACG CGGTGGAGTT CGCGAAGCAT CCGATGGTGT TCGTCGCGGC GCCCGGCCAT CCACTGATGC AGCGCAAACG CGTCGCACTA AAGGATCTCG AATCCGCGCA CCTGCTCGTG CGCGAACGCG GCGCGGGCAC GCGCTCGACC GTCGAGAGCC TGTTCAAGAA CGCGGGCCAC CGCTTTCATG TGGGCTCCGA ACTGTCGAGC AACGAGGCGA TCAAGCAGAT GGCCGAAGCC GGGCTCGGCG TCGCGTTCCT GTCGTTGCAC GCGTGTGCGC TCGAACTGCG CACGGGGCTG CTCGGGCAAC TGCCGTTTCC CGGCAATCCG ATCGAGCGCG AATGGTACGT GGTCACGCTC GCCGACCGGC GGATCTCGCA GGTGACGGGG CTGTTCCGCG ACTTCCTGAT CAAGCAGGGC GCGCCGGTGA TCGACGGCGC GACGGTGGCG CCGCACGAGC GGCGGCGCAA GTAG
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Protein sequence | MYSLIGKTAT FRQLKALDMI ARLGSVSRAA EELNLTQPAV SLQVRLLEEA VGAALLQRVG RGVQLTAAGE IVARYAREIL HLWSEAGDEV AALTGDLGGT LRIGAITTAE YLIPPLLVKF TATRPHVKTY FKVGNRDDII RMLATHEIDL AVMGSAPKEL RTHAVEFAKH PMVFVAAPGH PLMQRKRVAL KDLESAHLLV RERGAGTRST VESLFKNAGH RFHVGSELSS NEAIKQMAEA GLGVAFLSLH ACALELRTGL LGQLPFPGNP IEREWYVVTL ADRRISQVTG LFRDFLIKQG APVIDGATVA PHERRRK
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