Gene Bcen_5000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5000 
Symbol 
ID4094253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2274785 
End bp2275702 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content70% 
IMG OID638018282 
ProductAraC family transcriptional regulator 
Protein accessionYP_624848 
Protein GI107027337 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATC CGATTCTTGC CGCGCCGGCG GACAACGGCG TCCCGGTCAG CCTGCGCTCC 
AGCCGCGGGC TGGGCTGGCG TGGCTTCGGC GCGTCGCTGC TGGAGATTCG CGCGGGGACG
TACCGGATTC CGGCGGCCGA GCATCACCGG ATCGGCGTGC ATATCGGCGC GCCGGTGCGC
GCGGATTGCG TGTGCGACGG CGAGCGCGTG TCGCGCATCC AGGCGCACGG CGACGTCGAC
GTGATTCCGG CTGGCCTGCC CGGCCAATGG ACCGACAGCG CCGATTGCCG GATTCTGCAT
ATCGCGCTCA GCGACACCTT CGTGCGGCGC ACCGTCGAAC AGCTCGAACT GAAGCCGTCG
CACGCGCAGA TCCGCCGGCG GCTACAGGTG CGCGACCCGC GGCTGCAGCA CATCGCGTGG
GCGATGGCCG CCGAACTCGA AGCGGAAGAC GCATCGGACC CGCTCTACGC GGAGAGCCTG
TGCACGGCGC TCGTCGCGCG GCTGGTCGAC GGCCAGCCCG TGTTTCGCGA ACGCCGGCGC
ACGCTGGCGC CGAAGGCGGC GGCGCGCGTG ATCGACTATG TCGAGGCGAA TCTCGACCGG
CGCATGACGC TGGCCGAGCT CGCGGCGCTC GTGTCGATCA GCGTGCCGCA TTTCAAGGTG
CTGTTCCGCG AAACGCTCGG GATGCCCGTG CACCAGTACG TCGTGCGGCG CCGGGTGGAG
CGCGCGAAGA CGCTGCTGCT CGAAGGCCGG CTCAGCATCA GCCAGATCGC GCTGGAGGCC
GGGTTTGCGC ATCAGAGCCA CATGGCGAAC TGGATGAATC GCGTGCTCGG TGCGACGCCG
ACGGAGATTG CGCGGTCGGG CGTGCGGGGC GGGTTGCGGC TGGCGTATGA CGGTGAGGAT
GGCGGGAAAG ACGCATAA
 
Protein sequence
MSDPILAAPA DNGVPVSLRS SRGLGWRGFG ASLLEIRAGT YRIPAAEHHR IGVHIGAPVR 
ADCVCDGERV SRIQAHGDVD VIPAGLPGQW TDSADCRILH IALSDTFVRR TVEQLELKPS
HAQIRRRLQV RDPRLQHIAW AMAAELEAED ASDPLYAESL CTALVARLVD GQPVFRERRR
TLAPKAAARV IDYVEANLDR RMTLAELAAL VSISVPHFKV LFRETLGMPV HQYVVRRRVE
RAKTLLLEGR LSISQIALEA GFAHQSHMAN WMNRVLGATP TEIARSGVRG GLRLAYDGED
GGKDA