| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4985 |
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| Symbol | |
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| ID | 4094141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008061 |
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| Strand | - |
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| Start bp | 2256412 |
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| End bp | 2259693 |
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| Gene Length | 3282 bp |
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| Protein Length | 1093 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638018267 |
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| Product | Outer membrane autotransporter barrel |
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| Protein accession | YP_624833 |
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| Protein GI | 107027322 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.68858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATTC TGACCGGCGC GGTGCCGGTC AGTGCGTATG CGGTGTGCTC GGCCACCGCG
CCGGGCAGCG GCACGACGGT GACGTGTACC GGCGCGAATG CGCCGTCGGT CGTGGCCACG
GCCGGCAGCA CCGGTGTGAC GATCAACCTC GATTCGACCG TGACGGGCAG CTACGTGCTG
ACGTCCGCGC CGACGCCGTT CTCGGTCGAC ACGTCGAGCA CGATCACCAA CAACGGCAGC
CTGTCGATGT CCGGCAACGG CACGGGCGTC GCGAACCGCG GCGCGGTGCT GCTCGGCGTG
AACAACGGCA ACACGCTCAC CAATGCGGCG ACCGGCGTGA TTTCGACGTC GGGCACCTAC
AACGACGGGA TGGCCGCGAA CGGCAACAAC AATACGCTGG TCAACAACGG CACGATCACG
ACCACCGGCA ACAACGCGTA CGGGATGACG GCCGCGTGGG GGCAAAGCAA TCCCGGCGCA
TCGGGCAACC AGATCGTCAA CACGGGCACC GTGACGACGT CCGGCAACAA CGCGCGCGCC
GCGTCGCTGC TCGGCGGCAA TGGCACGATC ACCAACAGCG GCACGCTGAC GTCGAACGGC
CGCGATGCGC CGGCCGTCTA CATGCAGGGC AACAACGACA CGCTGGTCAA CAGCGGCACG
ATCCAGACCA CCGGCACCGC GACGAGCGGC GGCAGCGTCG ACGCCGTCGT ATCGAACACG
CTCGGCAGTT CGTTCACCGC GACGATCACG AACCAGGCCG GCGGCCGGAT CGTCAGCAAC
AACGGCATCG GCGTGCGCTC GACCAACGGC GCGACGACGA TCACCAACGC GGGGCTGATC
CAGGGCGGCG GCGGCACCGC GATCCAGGGC GGCAACGGCA ACGTGACGCT GATCCTGCAG
ACGGGCTCGC AGATCGTCGG CACGGCCAAC GGCGGCGCGG GCACCAACAC CGTGACGCTG
CAGGGCACCG GCACCGCGTC GAATGCGTTC ACGAATTTCC AGCGCCTGAC GATGGCCGGC
ACCGACTGGA CGTGGGGCGG CACCGGCACG TTCTCGACCG CGCTCGTGCA GAGCGGCACG
CTGAACCTCA CGGGCACGCT CGGCACGACG ACGGCGTCGG TCGTCGCGAC CGTCAACGCG
GGCGCGACGC TGCAGGCGAA TGCGTCGAAC CTGCCGCTGT CCGTCACCGA CAACGGGCTG
GTGCGCTTCC AGCAGGACAG CGCCGGAACG TACACGGGCA CGATCGCCGG TGCGGGCGCG
GTGGAGAAAA CCGGCGCGGG CACGTTGACG CTCACGCCGT CCGCGGCGGG TGGCAATACG
TATTCCGGCG GCACGACGAT CACGCAAGGC ACGCTGTCGG TCGCGGCGGA CAACGCGCTC
GGCGCTTCAT CGGGAAGACT GACTTTCAAC GGCGGCACGC TGCAGTTCGG CAGCGCGTTC
AATCTCGCGT CGAGCCGCGC GATCTCGACC ACTTCGAACA ACAGCGCGAT CGATACGCAG
GGGTTCAACA CGACGATCAT GCAGGACATC ACGGGTTCGG GCGGACTCAC CAAGCTGGGA
GACGGCACGC TGACATTGAA TGGCGTACAC AGCACGTATT CGGGCGGAAC GAACGTGGCT
GCCGGCACGC TCATTGTCGG TGATCTCGAT GCGGCGGCGG GTCTGCGGGG CGGTGGCCCC
TTGACCATTG CGCCCGGTGC GACGCTTGGC GGGTATGGCA GTGTGACGGG TAACGTGACG
AACAATGGCA CGATTTCAGT CGCGAATGCG CTGCCCAGTC TGGCCAGCAG TTTGCCGGGA
GACTTCCGGA TATTCGGAAC CCTGACGAAT GCGGGAGTTG TGGAGCTCCG TGGGCGCGTT
GTCGGTAACG GATTGGCCGT GTCGGGCAAT TATGTCGGGC AGAATGGAGC GGTCAACATG
AATACGACGC TTGCCGGCGA CGGTGCGCCA TCGGACACGC TGCTGATCGG CGGTGTGCCG
GCAGTGGCGA CGGCAAGCGG CAAGACGACA CTGAACGTAA CGAACGTCGG TGGTGCCGGT
GCGCTGACCA AGTCCGACGG TATTCGGTTG GTTTACGCCG TGAACTTTGC GAATACGGGT
AACGCGTTTA CGTTGGCGGG CGGTACGGTC AGCGCTGGCG CTTACTCCTA TTATCTGGTG
AAAGGCGGGG TTACCGCCTT GACGGGGGAG GACTGGTATC TGCGCAGCAC GGTTCCTCCG
CGGCCGGATC AGCCAACGCA GCAACCGCCA TTCAGTGTTG CCGACGGTAC GCCGGAATCG
ATCGTCGAGG CTGTCAAGAA CGCGGCGCCC GACGCCAAGC CGGAACCTGT TTACCGTCCC
GAAGTCCCGC TGTACTCGGA AGTGCCGGCT GTCGCGCGCC AGCTTGGATT GCTGCAGATC
GATACCTTCC ATGATCGCCA GGGCGAACAG GGACTGCTGG CCGAAAACGG CTCGGTGCCC
GTGTCGTGGT CACGTGTATG GGGCGGCTAC AGCAACATCA AGCAGAATGG CGATGTGACG
CCGTCCTATG ACGGAACGGT ATGGGGGATG CAGGTCGGGC AGGATCTCTA TGCGGACAAC
CGACCGAGCG GACACCGTAA CCACTACGGC TTCTTCCTCG GATTCTCGCG CGCGATTGGG
GACGTGAACG GTTTTGCGCT CGCGCAGCCG GATCTGGGCG TGGGTTCGCT GCAGGTGAAT
GCGTACAACC TCGGCGGATA CTGGACACAC ATTGGCCCGG GCGGCTGGTA TACGGACGCA
GTGGTGATGG GAAGCGTGCT GACCGTACGC ACGCATTCGA ACAACAATGT GAGTGGTTCG
ACGGACGGCA ACGCGGTCAC CGGTTCGGTC GAAGCGGGCG TGCCGATCTC GCTCGGCTAT
GGGCTGACGC TGGAGCCGCA GGCGCAGTTG CTGTGGCAAT GGCTGTCGTT GGCCCGATTC
AACGACGGCG TGTCGGACGT CACGTGGAAC AACGGCAACA CGTTCCTCGG CCGGATCGGC
GCGCGGCTGC AATACGCGTT CGATGCGAAC GGCGTGAGCT GGAAGCCGTA CTTGCGCGTG
AACGTGCTGC GTTCGTTCGG CAGCGATGAC AGGACGACGT TCGGCGGCTC GACGACGATC
GGCACGCAAG TCGGGCAGAC GGCCGGGCAG ATCGGCGCGG GGCTCGTCGC GCAGCTGACG
AAGCGCGGCA GCGTGTATGC GACGGTCAGC TACCTGACGA ACCTCGGTGG CGAGCATCAG
CGCACGATCA CTGGTAATGC CGGCGTCCGG TGGGCGTGGT GA
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| Protein sequence | MAILTGAVPV SAYAVCSATA PGSGTTVTCT GANAPSVVAT AGSTGVTINL DSTVTGSYVL
TSAPTPFSVD TSSTITNNGS LSMSGNGTGV ANRGAVLLGV NNGNTLTNAA TGVISTSGTY
NDGMAANGNN NTLVNNGTIT TTGNNAYGMT AAWGQSNPGA SGNQIVNTGT VTTSGNNARA
ASLLGGNGTI TNSGTLTSNG RDAPAVYMQG NNDTLVNSGT IQTTGTATSG GSVDAVVSNT
LGSSFTATIT NQAGGRIVSN NGIGVRSTNG ATTITNAGLI QGGGGTAIQG GNGNVTLILQ
TGSQIVGTAN GGAGTNTVTL QGTGTASNAF TNFQRLTMAG TDWTWGGTGT FSTALVQSGT
LNLTGTLGTT TASVVATVNA GATLQANASN LPLSVTDNGL VRFQQDSAGT YTGTIAGAGA
VEKTGAGTLT LTPSAAGGNT YSGGTTITQG TLSVAADNAL GASSGRLTFN GGTLQFGSAF
NLASSRAIST TSNNSAIDTQ GFNTTIMQDI TGSGGLTKLG DGTLTLNGVH STYSGGTNVA
AGTLIVGDLD AAAGLRGGGP LTIAPGATLG GYGSVTGNVT NNGTISVANA LPSLASSLPG
DFRIFGTLTN AGVVELRGRV VGNGLAVSGN YVGQNGAVNM NTTLAGDGAP SDTLLIGGVP
AVATASGKTT LNVTNVGGAG ALTKSDGIRL VYAVNFANTG NAFTLAGGTV SAGAYSYYLV
KGGVTALTGE DWYLRSTVPP RPDQPTQQPP FSVADGTPES IVEAVKNAAP DAKPEPVYRP
EVPLYSEVPA VARQLGLLQI DTFHDRQGEQ GLLAENGSVP VSWSRVWGGY SNIKQNGDVT
PSYDGTVWGM QVGQDLYADN RPSGHRNHYG FFLGFSRAIG DVNGFALAQP DLGVGSLQVN
AYNLGGYWTH IGPGGWYTDA VVMGSVLTVR THSNNNVSGS TDGNAVTGSV EAGVPISLGY
GLTLEPQAQL LWQWLSLARF NDGVSDVTWN NGNTFLGRIG ARLQYAFDAN GVSWKPYLRV
NVLRSFGSDD RTTFGGSTTI GTQVGQTAGQ IGAGLVAQLT KRGSVYATVS YLTNLGGEHQ
RTITGNAGVR WAW
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