Gene Bcen_4978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4978 
Symbol 
ID4094037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2248199 
End bp2249545 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content69% 
IMG OID638018260 
Producthypothetical protein 
Protein accessionYP_624826 
Protein GI107027315 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID[TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTATT CGGAATCGCG CTTCTGGCAT CCCCGGCAAC ATCCGCTCGC CGCGTCGCGC 
TCGCCGATCC GCATCACGCG CGGCGAAGGC TGCTACCTGT ACGACGACAC CGGCCGGCCG
TATCTCGACG CGGTCGCGTC GCTGTTCAAC GTGTACGTCG GCCACGGCCG GCGGGAGATC
AAGGAAGCGA TCGTCCGGCA GCTCGACGAA CTCGAATATC ACCCGGTGTT CGCCGGGTTC
AGCCATCCGC GCGCGGAAGA ACTGTCGGCG CGGCTGATCG ACATGCTCCA GCCGGAAGAC
ATGAGCCGCG TAATCTTCGG CTCCGGCGGC TCGGACGCCG TCGAGGCCGC GCTGATGATC
GCGCGGCAGT ACTGGAAGGT GTCCGGGCAG CCCGAGCGCA CCAAGTTCAT CGCGCTGCGC
CAGGCCTATC ACGGCTCGCA CTTCGGCGGC AGCTCCGTCA CCGGCAACAC CGTCTACCGG
CGCAACTACG AGCCGGCGCT CGCCGGCTGC TTCCACGTCG AGACGCCGTG GATCTATCGC
AACCCGTTCA CGCATGACCC AGAGGAACTC GGCCGGCTGT GCGCGTCGCT CGTCGAGCGC
GAGATCCTGT TCCAGGGGCC CGACACCGTG GCCGCCTTCA TCGCCGAACC GGTGCAGGCG
ACCGGCGGCA TCATCGTGCC GCCCGCGAAC TACTGGCCGC TGGTGCGCGA AGTGTGCGAC
CGCCACGGCG TGCTGCTGAT CGCCGACGAA GTGGTGACGG GCTTCGGGCG GACCGGCGCC
GCGTTCGGCA GCCGCGGCTG GGGCGTCGCG CCGGACATCA TGTGCCTGGC GAAGGGCGTG
TCGTCGGGAT ATCTGCCGCT CGGTGCGACC GTCGTCAACC GCCGCATCGA GAACGCGTTC
GCGTCCAACC CGGGCGGCAT CGGCACGCTG ATGCACGGCT ACACCTACTC GGGCCATCCG
ATCGTCTGCG CGGCCGCGCT CGCGAACCTG CAGATCATCG TCGACGAGGA TCTCGCCGGC
AACGCGGCGC GCGAAGGTGC GTACCTGCTG GAGCGGCTGC AGCCGCTCGT CGACCGCTAT
CCGGTGGTCG GCGACGTGCG CGGCAAGGGG CTGCTGGTCG GCATCGACCT CGTGAAGGAC
AAGGCGACGC GCGAATCGAT CGAGCCGTCG GACGGCTATG CGGCCGCGCT CGCCGACGCG
GCGCGCGATG CGGGCGTGCT GATCCGCTCG CTCGGCAACC GGCTCGCGAT CGCGCCGCCG
CTCGTGATCG GTCGCGAGGA CGTCGACCGG ATCGTGCACG CGGTCGAGCA CGCGTTCGAA
ACGGTGCCGC GCTGGACCGC ACGCTGA
 
Protein sequence
MSYSESRFWH PRQHPLAASR SPIRITRGEG CYLYDDTGRP YLDAVASLFN VYVGHGRREI 
KEAIVRQLDE LEYHPVFAGF SHPRAEELSA RLIDMLQPED MSRVIFGSGG SDAVEAALMI
ARQYWKVSGQ PERTKFIALR QAYHGSHFGG SSVTGNTVYR RNYEPALAGC FHVETPWIYR
NPFTHDPEEL GRLCASLVER EILFQGPDTV AAFIAEPVQA TGGIIVPPAN YWPLVREVCD
RHGVLLIADE VVTGFGRTGA AFGSRGWGVA PDIMCLAKGV SSGYLPLGAT VVNRRIENAF
ASNPGGIGTL MHGYTYSGHP IVCAAALANL QIIVDEDLAG NAAREGAYLL ERLQPLVDRY
PVVGDVRGKG LLVGIDLVKD KATRESIEPS DGYAAALADA ARDAGVLIRS LGNRLAIAPP
LVIGREDVDR IVHAVEHAFE TVPRWTAR