Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_4969 |
Symbol | |
ID | 4094028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 2236654 |
End bp | 2238147 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 638018251 |
Product | RND efflux system, outer membrane lipoprotein, NodT |
Protein accession | YP_624817 |
Protein GI | 107027306 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGTTC CGTCCATTCC GTCCGCTTCG CCCGTTTCTC CCGCCGTCGA GACACGCTTG CCGCGCGTGC GGCGCGCCAC CTGTGCGGCC GTGCTGCTGG CGTCGGCCGC GCTGGCCGCG TGTTCGGTCG GCGAGCCGTA TCGGCCGCCG GTGTCCGACG CGACGCGCAC CGGGCCGTTT GACGCGGTGG CCGACGTGCC GGCCGCGGCC GCCGGCGAAC CGCCGCAACG CTGGTGGCGG CTGTACGACG ATCCCGTACT CGACGGCCTC GTGCGCGATG CGCTGGCGCA GAACCGCGAT CTCGCCGCGG CCGTCGCGCG GGTCGAGCGT GCGCGTGCCG TGTTCGACGA GGCGGGCGCC GCGCGGTTGC CCGACACGAC GGCCGGCTTC GGCGTCGACT ACGGCAAGCA CGCGCCCGAC CAGATCGTTG CGGCGGCCAA GGACACCGAT GCGCGCACGC GCTGGGGTTT CGCGCCGTCG TTCTCGCTGT CGTGGGAAGT CGATCTGTGG GGCCGCGTGC GCCATCTGGT CGACGCCGCG CAGGCCGACG CCGACGCGGT GCAGGCCGCG TCCGATGCGA TGCGCGTCGT GGTGGCCGCC GAGACGACGG CCGCGTATGC GCAGGTGTGC GCATACGGCG AGCGGATCGA CGTGGCCGAG CAGTCGGTCG GCATCGCGGA CCGGCTGGCC GCGCTGACGG CGAAGCAGCG CGCGCACGGG CTCGTGTCCG ACCTCGAAGT GGCGCGTTCG CGCGCGTTCG CCGACGATAC GCGCGCCGAT TTGCCGGCGC TCGTCGGCTC ACGGCGCGCG GCGCTGTACG AACTGGCGGT GCTGACCGGG CGCGCGCCCG GCGCGCTGCC CGACGCCGCC GCGCATTGCC GCACCGCGCC GATGCTCGCT CGGCCGTTCC CGGTCGGCGA CGGCGCGTCG CTGCTGCGCC GTCGCCCCGA CCTGCGCGAG AGCGAGCGCC AACTGGCCGC CGCGAATGCG CGGATCGGCG TGGCGACGGC CGAGCTGTAT CCGTCGATTT CGCTCGGCGG CTCGGTGAAC TGGCTGTCGA CCGGCGGCGA TCCGTCGACG CTCGGCGACA AGTACGCGAT CGCTTGGGGC GTCGGCCCGC TGATCACGTG GCGCTTTCCG AACATGGCGG TGAGCCGCGC GCGGCTCGCG CAGGCCCGCG CCGACGACAC GCTCGCCCGT GCGCAATTCG ATGCGCAGGT GCTGCGCGCG CTGAAGGAAA CCGAGCAGGC GCTGGCCCGC TACGGCGCCG CGTGGCGCCG CCGCGCCGCG CTCGAAACCG CGCGTGCCGA GCATGCGCGC GCCTATCGCC TCGCCGAGCT GAACTACGAA GCCGGCGCCC TCGATTTCCT CGGCGTGCTC GACGCGCAGC GCAGCCTCGT CGCGGTCGAT TCGGCGCTGG CTGAGTCGAC GCAGCAGGTC TCGCTCGACC AGGTCGCCGT GTTCAAGGCG CTCGGAGGCG GCTGGCAACC GTAG
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Protein sequence | MRVPSIPSAS PVSPAVETRL PRVRRATCAA VLLASAALAA CSVGEPYRPP VSDATRTGPF DAVADVPAAA AGEPPQRWWR LYDDPVLDGL VRDALAQNRD LAAAVARVER ARAVFDEAGA ARLPDTTAGF GVDYGKHAPD QIVAAAKDTD ARTRWGFAPS FSLSWEVDLW GRVRHLVDAA QADADAVQAA SDAMRVVVAA ETTAAYAQVC AYGERIDVAE QSVGIADRLA ALTAKQRAHG LVSDLEVARS RAFADDTRAD LPALVGSRRA ALYELAVLTG RAPGALPDAA AHCRTAPMLA RPFPVGDGAS LLRRRPDLRE SERQLAAANA RIGVATAELY PSISLGGSVN WLSTGGDPST LGDKYAIAWG VGPLITWRFP NMAVSRARLA QARADDTLAR AQFDAQVLRA LKETEQALAR YGAAWRRRAA LETARAEHAR AYRLAELNYE AGALDFLGVL DAQRSLVAVD SALAESTQQV SLDQVAVFKA LGGGWQP
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