| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4968 |
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| Symbol | |
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| ID | 4094027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008061 |
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| Strand | - |
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| Start bp | 2235470 |
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| End bp | 2236594 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638018250 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_624816 |
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| Protein GI | 107027305 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACGA CTGCCGTACC CGAAAAAGCC AAAACCGCCC GGTTCTCCCG GCGCCAACTG
ATCGCCGCGG GCGTCGTGCT CGCCGTCATC GCGCTCGCCG TGTTCGGCTG GCACTGGTGG
ACCGTCGGCC GTTTCATCGA AAGCACCGAC GACGCGTATG TCCGCGCCGA CGTCGTGACC
GTCAGCTCCC GCGTGTCGGG TTACGTCACG CAGGTGGCGG TCGACGACAA CCAGCCGGTG
AAGCGCGGCG ACGTGCTCGT GCGGCTCGAC GACCGCGACT ATCGCGCGAA GGTCGACGAT
GCGCAGGCCG CCGTCGCGGC GGCCGACGCG ACGCTGCAGG CCGAGCAGGC GGCGGCCGCG
ATGCTCGACG CGCAGATCGG CCAGCAGCGC AGCCAGATCG CGCAGGCCGA CGCCGATGCG
GCCGCCGCGC GCGCCGAAGC CGCGCGGCGC GACGCCGATG CGACGCGCTA CAAGCAACTG
CTGGCCGAAT CCGCCGCGAG CGGGCAGCGC TGGGAGCAGG CCCATGCGGA CGCATTGAAG
GCGCGCGCCG AGCTGACCCG CGCCGGCGCG GCCGTGCGGG TGCAGACCGA CCAGCAGACC
GTGCTGCAGC GCCGCCGCGA ACAGAGCACC GCGGCGATCG CGCAGGCACG CGCCCGGCTT
GCGGCGGCCC AGGCGAAGCT GGCGCTCGCG CAACTCGATC TCGACCACAC GGTGATCCGG
GCGACGCGCG ACGGCAGCGT CGGCCAGCGC GCGGTGAGAG CCGGCCAGTA CGTCGAAGTC
GGGATGCCGC TGCTCGCGGT GGTGCCGCTG AGCGACGTGT ACGTGGTGGC GAACTTCAAG
GAAACGCAGT TGGGCGCGAT GCACGACGGC CAGCCCGTCC AGATCGACGT CGACACCTAT
TCGGGCCATA CGCTGCACGG CCGCGTGATC GGCCTCGCGC CGGGCTCGGG CGCGCAGTTC
GCGCTGCTGC CGCCGGACAA CGCGACCGGC AACTTCACGA AGATCGTGCA GCGCATCCCG
GTGAAGATCC GCGTCGATAC GCCGCCGGCC GGCGTCGTGC TGCGGCCCGG GATGTCCGTG
ATCGCGCGCG TCGACACGCG CGGCACGCAG GGGGCCGGCT CGTGA
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| Protein sequence | MSTTAVPEKA KTARFSRRQL IAAGVVLAVI ALAVFGWHWW TVGRFIESTD DAYVRADVVT
VSSRVSGYVT QVAVDDNQPV KRGDVLVRLD DRDYRAKVDD AQAAVAAADA TLQAEQAAAA
MLDAQIGQQR SQIAQADADA AAARAEAARR DADATRYKQL LAESAASGQR WEQAHADALK
ARAELTRAGA AVRVQTDQQT VLQRRREQST AAIAQARARL AAAQAKLALA QLDLDHTVIR
ATRDGSVGQR AVRAGQYVEV GMPLLAVVPL SDVYVVANFK ETQLGAMHDG QPVQIDVDTY
SGHTLHGRVI GLAPGSGAQF ALLPPDNATG NFTKIVQRIP VKIRVDTPPA GVVLRPGMSV
IARVDTRGTQ GAGS
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