Gene Bcen_4945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4945 
Symbol 
ID4093908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2210966 
End bp2212288 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content68% 
IMG OID638018227 
Productmajor facilitator transporter 
Protein accessionYP_624793 
Protein GI107027282 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAGGC ACGTGCCCGG CTCGACAGGA GACAACATGA AAACGCGTTA CCGCTGGTGG 
ATCGGCGCGC TGCTGTTCGG CGCCGGCATG CTGAACTATC TCGATCGCGC GGCGCTGTCC
GTCGTCGCGC CGATCATCAA GCGCGAACTC GGCATCGACG ACGCGCAGAT GGGTATCCTG
TTCAGCAGCT TCTTCATCGG CTACTGCGTG TTTTGCTTCG TCGGCGGCTG GGCCGCGGAC
CGGTTCGGGC CGCGTCGCGT GTTCGCGTGC GCGGCGGGCG TGTGGTCTCT GTTCTGCGGC
GCGACAGCGC TCGCCGGGTC GTTCGCGCAC CTACTGATCG TGCGCGTCGC GTTCGGGATC
GGCGAAGGGC CGATGGGGAC GACCACCAAC AAGGCGATCT CGAACTGGTT CCCGCGCCGC
GAAGCGGGGC GCGCGGTCGG CTGGACCAAC GCCGGGCAGC CGCTCGGTGC GGCGATCGCG
GCGCCGATCG TCGGCCTGGT TGCGCTGCAG TTTGGCTGGC GCGTTTCGTT CGTCGTGATC
GCCACGCTCG GCTTCGTGTG GCTGGCCGCG TGGTGGGCGT TGTTCCGCGA CGATCCGGCG
AGCCACCCGC GCGTGTCGCC GGAAGAGGTG CGCGAGATCG CATCCGACCG GACGGTCGGC
GTCTCACTGG ATGCGCATGC GGACGAGCGC GCCGCGCGTC CGCTGCTGCG CGATCTGCTG
TCGCGGCCGG TGCTCGGCGT CGCGCTCGCG TTCTTCAGCT TCAACTACGT GCTCTATTTC
TTCCTGTCAT GGTTGCCCAG CTATCTCACC GACTACCAGC ATCTAAACAT CAAGCAGATG
AGCGTCGTCG GGATTCTGCC CTGGCTCGGC GCGACCGTCG GTTTCGTGGC CGGCGGCACC
GTGTCGGACC GCATCTACCG GCGCACCGGC GACGTGCTGT TCGCGCGCAA GATCGTGATC
GTCGTCGGGC TGGCGGTGGC GGCGGCGTGC GTGCTGCTGG CGTCACGGGT GAGTTCGCTC
GGCGCGGCCG TCACGTTGAT CGCGATCGCA AGCCTTTTCG CGTTCATGGC ACCGCAGGCT
TGCTGGTCGT TGCTGCAGGA AATCGTGCCT CGCGAACGCG TCGGCTCGGC CGGCGGGTTC
GTTCATCTGC TCGCGAATCT CGCAGGCATC CTGTCGCCAA GCTTGACCGG CTGGCTCGTC
CAGTATGGTG GTGGGTATGC AAGTGCGTTC GTGCTTGCGG GCGCGTCGGC GCTCGCCGGT
GCGGTTATCC TGACGTTCGC GGTGCGCGCG CGGGCCGTTT CGCAGATGCG CCGGGCCGCC
TGA
 
Protein sequence
MRRHVPGSTG DNMKTRYRWW IGALLFGAGM LNYLDRAALS VVAPIIKREL GIDDAQMGIL 
FSSFFIGYCV FCFVGGWAAD RFGPRRVFAC AAGVWSLFCG ATALAGSFAH LLIVRVAFGI
GEGPMGTTTN KAISNWFPRR EAGRAVGWTN AGQPLGAAIA APIVGLVALQ FGWRVSFVVI
ATLGFVWLAA WWALFRDDPA SHPRVSPEEV REIASDRTVG VSLDAHADER AARPLLRDLL
SRPVLGVALA FFSFNYVLYF FLSWLPSYLT DYQHLNIKQM SVVGILPWLG ATVGFVAGGT
VSDRIYRRTG DVLFARKIVI VVGLAVAAAC VLLASRVSSL GAAVTLIAIA SLFAFMAPQA
CWSLLQEIVP RERVGSAGGF VHLLANLAGI LSPSLTGWLV QYGGGYASAF VLAGASALAG
AVILTFAVRA RAVSQMRRAA