Gene Bcen_4944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4944 
Symbol 
ID4093907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2210115 
End bp2210822 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content62% 
IMG OID638018226 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_624792 
Protein GI107027281 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCC AAGGTTCTGT CGCGCTCGTT ACGGGTGCCA ATCGCGGACT GGGTGCAGCC 
TTCACCCGCG CCTTGCTTAC CGCTGGCGCG GCCAAGGTCT ATGCAGCAGC GCGCGAAGCG
TCCACCGTCA CCGCATCTGG CGTGGTGCCC GTACGGCTCG ACGTGACTCG CGCCGATCAG
GTCGAAGCGC TCGCCCGCGA ATTGGGCGAC GTCAGCTTGC TGGTGAACAA CGCCGGCATC
GGAGGCTCCG GCGCAGTGCT TGCACCATCA TCGATCGATA TGCTGCGACA GCAGTTCGAG
ACAAATGCCG TGGGGCCGTT ACGGATGGCG CAAGCGTTCG CGCCGATCCT GGCGGCGTCT
GGCAGTAGTG CCATGATCAA TGTCATTTCC GCGCTCAGTT GGGCGACTCT GCCAGGCATT
ACCGGCAGTT ACAGCGCATC GAAGGCCGCC GCTTGGGCCT TGAGTAACGC GATGCGGCAG
GAATTAAGTG CCCAAGGCAC AGAAGTTCTT TCGCTGCATG TCGCCTTCAT GGATACCGAC
ATGGCGCGGG GCGTACCCGG CCCCAAGGCT TCCCCAGACG AGGTTGCGCG TATGGCTCTC
GCCGCATTAG AGGCCGGTCA CTCAGAACTC TTGGCGGATG AGGTTACCCG CAGCGTACAT
GCTGGCCTGA CGGCAGTGCC ACCGATGTAT CTAGGAATGC TTGGATGA
 
Protein sequence
MKIQGSVALV TGANRGLGAA FTRALLTAGA AKVYAAAREA STVTASGVVP VRLDVTRADQ 
VEALARELGD VSLLVNNAGI GGSGAVLAPS SIDMLRQQFE TNAVGPLRMA QAFAPILAAS
GSSAMINVIS ALSWATLPGI TGSYSASKAA AWALSNAMRQ ELSAQGTEVL SLHVAFMDTD
MARGVPGPKA SPDEVARMAL AALEAGHSEL LADEVTRSVH AGLTAVPPMY LGMLG