Gene Bcen_4893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4893 
Symbol 
ID4095385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2158754 
End bp2159626 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content66% 
IMG OID638018176 
Product5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 
Protein accessionYP_624742 
Protein GI107027231 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTTG CAGTCTATAA AACGGATGGG CACCGCGGCA TCGCGGTGGA GCACGGCGGG 
CGATGGTTCG GGCTGACCGC CGAGGACACC GCCTATCCGG GCGATCTGGA TGCGCTGCTG
GCGCACGGCG CTGATCTTGC CGAAGTGGGC GCGCTTCTCG CGCGCGGCGC GCCGGTCGAT
CTCGAGGCGG TGCGCTTGCT GCCGCCGTTC GGACGGTCCG GCAAGATCGT CTGTGTCGGA
TTGAACTACC TCGACCACTC GACCGAGACC GGGTTTGCGA AGCAGGCCTA TCCGACCGTG
TTCGCGCGGT TTGCGTCGAG CCTGATCGGC CATGGCGACC CGATCGCGCT GCCGGCGCAA
TCGTCCCAAC TCGACTACGA GGGCGAACTA GTGGCGGTGA TCGGCAAGGG CGGACGCAGC
ATCGCGCGCG AGCGGGCGCT CGATCATGTT GCCGGCTATT CGATTTTCAA CGACGCCACG
CTGCGTGATT ACCAGTTCCG CACGCCGCAA TGGACGATGG GTAAGAACTT CGACGGGACG
GGGGCATTCG GGCCGTGGTT CGTCACGGCC GACGAACTGC CGCGCGGCTG CAAGGGGCTG
AAGATCCAGA CGCGCTTGAA CGGTGCGGTC GTGCAGGAGG CATCGACGTC GGACATGATT
TTCGATGTCG AGACGCTGGT CGTGCTGCTG AGTGACGTGA TGACGCTGCA GGCCGGCGAT
GTGATCGTCA CGGGCACGCC TGCCGGTATC GGGATGGCGC GCGAACCGCA GCTCTGGATG
AAAGCCGGAG ACGTGTGCGA AGTCGAGATC GAGCGGCTCG GCGTGTTGCG CAACCCGGTC
GCGTACGTGG GGACGGTCCG GCGCGACGCT TGA
 
Protein sequence
MRFAVYKTDG HRGIAVEHGG RWFGLTAEDT AYPGDLDALL AHGADLAEVG ALLARGAPVD 
LEAVRLLPPF GRSGKIVCVG LNYLDHSTET GFAKQAYPTV FARFASSLIG HGDPIALPAQ
SSQLDYEGEL VAVIGKGGRS IARERALDHV AGYSIFNDAT LRDYQFRTPQ WTMGKNFDGT
GAFGPWFVTA DELPRGCKGL KIQTRLNGAV VQEASTSDMI FDVETLVVLL SDVMTLQAGD
VIVTGTPAGI GMAREPQLWM KAGDVCEVEI ERLGVLRNPV AYVGTVRRDA