Gene Bcen_4892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4892 
Symbol 
ID4095384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2156808 
End bp2158250 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content66% 
IMG OID638018175 
Productamidase 
Protein accessionYP_624741 
Protein GI107027230 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATT TCCAAACGCT CATCGCCACG CATGATGGCA TCGCGCTCGC GGCGCTCGTT 
CGCGAGAAAG AAGTAACGCC GACGGAACTG CTGGACGCCG TCCTCGCCAG TCTCGACGCG
ATCAACCCCT CGCTGAATGC CGTCGCAGAG CGCCTCGACG AAACGGCCAG ACTAGCCGCA
TCGACCATCA CTGGCCACGA GAGCGTACTC GCCGGTGTCC CGACACTCAT CAAGGACCTT
TTCATGCCGG TGCGCGGCGC ACGCATGGCG AACGGATCGT TCCTGTTCGG CGACTACCGG
CCCGACTTCG ACGGCGAACT CGTGGGGCGC CTACGGCGCG CGGGCATACC GATCGCTGGA
ACCTCGCTGT CGCCCGAACT GGGCACGTCG TTTTGCACCT CCTCAGCGCG TTTCGGCGTC
ACACGCAATC CGTGGAATCC GCATGTGAGC GCCGGCGGAT CGAGCGGCGC CGCGGCAGCG
CTTGTCGCCG CGCGCGTGCT GCCGTTCGCG CACGGCAACG ACGGCGGTGG CTCGCTGAGG
GTGCCCGCGT CCTGCTGCGG CGTGTTCGGA TTGAAGCCGA CACGCGGTCG AACGCCGAAT
GGCCCGATGA TCGGCGAAGG ATGGGCCGGC ATGGCCATCA ACCACGCGAT CACGCGCTCG
GTTCGCGACA GCGCCGCCCT GCTGGACCTG ACCGCGGGCG CCGATACCGG CGCGCCCTAT
GCGGCGCCAT GCCAACCGGA GACGTTTCTC GCGGCCACGC AGCGCGATCC GCGGCCGCTA
AAAATCGCCG TGATAGAGCA AGCGCCACCG TGGCCGCTTC ATCCGGCCTG CCGACCCGCA
CTCGCACATA CCGTCGCGTT GCTGCGCTCG CTCGGACACC ACGTCGAGCC GCTCGATAGT
CCGGTCGATT CGGAGGCGTT CTATGACCGT GTATTCACGA TCATCGGCGC ACAAACGCGT
GCGCTGGTCG ACATGATAGG CAACCAGCGC GGACTTCCGG TACGCGACGG CGAAATCGAG
GCCCGCACCC GTATCATCCT GCGGGAGAAA GGCAATGCAA GCGGCGCCGA ATACGCGAGC
GCCGTCGACT GGATCCATGC ATTGGGCCGG ACGTTCGGCC GGTTGATGGA GCGCTACGAC
GTGCTGCTAA CGCCGACGCT CGCGATGCCG CCGCTTGCGC CGGCCGAACT TGCGACCGCG
GACGACACGC AGTCGTTGAG CGAAGTCATC GATCGAGCGC ATCGGTTTTC TCCGTTCACG
GCATGGTTCA ACGCGACCGG TCAGCCCGCG ATGTCGGTGC CGCTTTACTG GGACGAGCAA
GGCCTGCCGA TCGGCAGCCA TTTCGCGGGG GCGTTCGGCG CAGAGTCGCT GCTGTTCTCG
CTCGCCGCGC AGCTTGAGCG CGCTGCACCG TGGGCGGATC GGGTTCCCCC GCTTTGCGTT
TGA
 
Protein sequence
MKDFQTLIAT HDGIALAALV REKEVTPTEL LDAVLASLDA INPSLNAVAE RLDETARLAA 
STITGHESVL AGVPTLIKDL FMPVRGARMA NGSFLFGDYR PDFDGELVGR LRRAGIPIAG
TSLSPELGTS FCTSSARFGV TRNPWNPHVS AGGSSGAAAA LVAARVLPFA HGNDGGGSLR
VPASCCGVFG LKPTRGRTPN GPMIGEGWAG MAINHAITRS VRDSAALLDL TAGADTGAPY
AAPCQPETFL AATQRDPRPL KIAVIEQAPP WPLHPACRPA LAHTVALLRS LGHHVEPLDS
PVDSEAFYDR VFTIIGAQTR ALVDMIGNQR GLPVRDGEIE ARTRIILREK GNASGAEYAS
AVDWIHALGR TFGRLMERYD VLLTPTLAMP PLAPAELATA DDTQSLSEVI DRAHRFSPFT
AWFNATGQPA MSVPLYWDEQ GLPIGSHFAG AFGAESLLFS LAAQLERAAP WADRVPPLCV