| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4850 |
|---|
| Symbol | |
|---|
| ID | 4095169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 2116651 |
|---|
| End bp | 2117802 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638018135 |
|---|
| Product | TrbL/VirB6 plasmid conjugal transfer protein |
|---|
| Protein accession | YP_624701 |
|---|
| Protein GI | 107027190 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3704] Type IV secretory pathway, VirB6 components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGGCC TCTTCAGCGC GGTGGGCGGT ACGCTCGAAA ATGGTATGCA CACGTACGTA
AGCGATGCAT CGTCTGCGTT GTCGTCCGCG TTAGTACCCG CGGCTACCAC GGGAGTGGTG
ATCTGGGTTC TCGCGTATGG CATGGCAGTG ATTCGCGGAG AGGCACACGA GCCGGTGCCG
GCATTTGCGT GGCGAGGTAT GAAAGTCGTC ATCACGCTCG CGTTTGCGCT AAGTGCGGGG
CTGTACCAGT CCCAGGTCGT CAGTGCCGTG AGCGAGACGA CAACCGGCGT CGCCCAGGCA
ATTCAGACAG CAGCCGTTCG TACCGGCGCA GGAAATGTTG GATGCGGGTC AGTTGAACAA
GCGAGCGAGG CAAGCGAGCA TGCTGTGGGC ATTTACCGGA CGCTCGATTG CTATGATCGG
CAGCTTAACC TCGTGGTCGA CGCCTATTTC GACAAAGCGA CCCATGAAGG TCTGAGCATG
AGCGGCATCG TCGCAGGTAT CGGCGACCTC GCTTGTGGTC TGGTTGCCGC CTTCGGGGGC
GCAATCTTTC TGATGGTGCT CGGCGTCGAA GTGATGATGG CACGCATGCT GCTCGACCTC
GTACTTGCGC TGGGTCCCAT ATTCATTGTG TGTGGAGCAT TTAGTCCTAC TGTTAGATTT
TTCGAAGCAT GGACTGCCAA GCTCGTGAAC TATGCGCTGT TGCAAGTGTT GGTTGCGGCT
TTTCTTGGTC TCGCGCTCGC GGCGTTCTCG GCCAACCTCG CACCGTTTCA AGTAACGACT
GCTGATCCGG ACGCTTCTGC CGATGCGTTG GCCGCTGCCG CCCGTCAAGC ACTTCAAGCA
AGCGCCCCGT GGGCGGCGGC TTTCGGCATG TTTGTTACAT CTATGCTACT GGCGACGATT
GGGTGGCAAT TGCCGGCCGT GGCTTCGGGG CTTGCGGGCG GTGCGACTGT CTCAGGCTTT
GGAGCGTTTG TCGCCGGCTA CGCATCCAGA CAGGCGGCCG GTGCGATGGC CTTCGCACTG
CGCAGTGCAA ACCGAAACGC GTCTTCCGGC GGTCGAATAT CTAGGCCTGG CGCATTGGTG
AGCACCGCCT CGCCGCATCC TCCAGCCTAT CAACGGGCTG CACGCGAGCA GCTTGACCGT
GCGCACGACT GA
|
|---|
| Protein sequence | MNGLFSAVGG TLENGMHTYV SDASSALSSA LVPAATTGVV IWVLAYGMAV IRGEAHEPVP
AFAWRGMKVV ITLAFALSAG LYQSQVVSAV SETTTGVAQA IQTAAVRTGA GNVGCGSVEQ
ASEASEHAVG IYRTLDCYDR QLNLVVDAYF DKATHEGLSM SGIVAGIGDL ACGLVAAFGG
AIFLMVLGVE VMMARMLLDL VLALGPIFIV CGAFSPTVRF FEAWTAKLVN YALLQVLVAA
FLGLALAAFS ANLAPFQVTT ADPDASADAL AAAARQALQA SAPWAAAFGM FVTSMLLATI
GWQLPAVASG LAGGATVSGF GAFVAGYASR QAAGAMAFAL RSANRNASSG GRISRPGALV
STASPHPPAY QRAAREQLDR AHD
|
|---|
| |