Gene Bcen_4788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4788 
Symbol 
ID4095754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2057653 
End bp2058465 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content69% 
IMG OID638018074 
ProductBeta-lactamase 
Protein accessionYP_624640 
Protein GI107027129 
COG category[V] Defense mechanisms 
COG ID[COG2602] Beta-lactamase class D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.802032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCACTTGA AGCACTGGCA TTACGCGCTG TTCGCCTTCG CCGGCCTCCT GGCCGCCGCG 
TCCTCTCACG CGCACCCCGT CTGCACCGTC GTCGCCGACG CCGCCACCGG CAAGCTGCTC
GTGCAGCAGG GCGACTGCTC GACCCGCGTA ACGCCGGCAT CGACGTTCAA GGTCGCCATC
GGCCTGATGG GCTTCGACGC CGGCGTGCTG AAGGACGAAC ACACGCCCAC GCTCGAGTTC
CACGCCGGCT ACCCCGACTG GGGCGGCGCG CCGTGGCGCG AACCGACCGA TCCGGCGCGC
TGGATGAGGC TGTCGGTCTT CTGGTATTCG GAGCAGGTCA CGCAGGCGCT CGGGCAGGCA
CGCTTCCAGC AGTACACGAG CGCGTTCGAC TACGGCAACG CGGACGTCAC CAGCAAAGCG
GGCGAACTCC CCGGCATGAT GGGCGCGTGG GTCAATTCGT CGCTACGGAT CTCGCCGCTC
GAACAGGTCG CGTTCATGCG CAAGATCGTG CAGCGGACGC TGCCCGTCAG CGCGCACGCG
TATGACATGA CTGCGCGCAT CACGCTGCTC GACGCGCAAC GGGGCGGCTG GACGGTGCAC
GGCAAGACCG GCACCGGCTC GCCGGGCATC CAGTACGACG CGGCACACGC GTACGGCTGG
TTCGTCGGCT GGGCGACGAA GGGATCGCGC ACGCTGGTGT TCGCGAACCT GATCCAGGAC
GACGAGCGGC AAACGCCCAA TGCCGGCCTG CGCTCGCGCG ACACGTTCCT CGCGGCGCTG
CCGACGCTCG CCGCCGCGGC CCCGCCGCAA TGA
 
Protein sequence
MHLKHWHYAL FAFAGLLAAA SSHAHPVCTV VADAATGKLL VQQGDCSTRV TPASTFKVAI 
GLMGFDAGVL KDEHTPTLEF HAGYPDWGGA PWREPTDPAR WMRLSVFWYS EQVTQALGQA
RFQQYTSAFD YGNADVTSKA GELPGMMGAW VNSSLRISPL EQVAFMRKIV QRTLPVSAHA
YDMTARITLL DAQRGGWTVH GKTGTGSPGI QYDAAHAYGW FVGWATKGSR TLVFANLIQD
DERQTPNAGL RSRDTFLAAL PTLAAAAPPQ