Gene Bcen_4772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4772 
Symbol 
ID4096030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2043834 
End bp2045225 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content68% 
IMG OID638018058 
Productmajor facilitator transporter 
Protein accessionYP_624624 
Protein GI107027113 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00893] d-galactonate transporter 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGCCCAT CCGCGTCACG CACCCATGCC AACCCGCCGC AGCGGCCATC CGCGCACACC 
GGTACCTCAT CCGAATCAGC TACCCGCGCG GCCGCCGCCG CGGCCCCGGC CACGCCGCCG
AGCCGCAAGC GGCTGCTGAT CCTCGCGCTA CTGTTCGTCA CGGTCGTGAT CAACTATCTC
GACCGCAGCA ACCTGTCGAT CGCGGCGCCC GAACTGTTCA AGGAACTGAA CATCGATCCG
GTCCACGCCG GCCTCGTGTT CTCCGCGTTC GGCTGGACCT ATGCGCTGAT GCAGATTCCG
GGCGGCTGGC TCGTCGACAA GGTGTCGCCG CGCGTGCTGT ATGCGGGTGC GCTCGCACTG
TGGTCGGCCG CGACGCTGCT GCTCGGCTTC GCCGGTTCGT TCGTCGGACT GATCGTGCTG
CGCCTCGCGG TCGGCGCGCT CGAAGCGCCG GCCTATCCGA TCAACAACCG CGCGGTGACG
ACCTGGTTCC CGACCCGCGA GCGGGCGAGC GCGATCGGCG GCTACACGTC GGGGCAGTTC
GTCGGCCTTG CGTTCCTCAC GCCGGTGCTC GCGTGGCTGC AGGTGCATCT CGGCTGGCAC
ATGGTGTTCG TCGCGACCGG CCTCGCCGGC ATCGCGTGGG CCGCGGTCTG GTATGCGGTG
TATCGCGAGC CGCGTGCGTT ACGCGGCGTC AATGCGGCCG AAATCGCGCT GATCCGCGAC
GGCGGCGGGC TCGTCGATCT CGAGGACCGC ATCGCGGCGC GCAGCGACCG CGCACCATCG
ACGTGGCGCG ATCTCGGCGT CGTGCTCGGC CGGCGCAAGC TGTGGGGCAT CTACCTCGGC
CAGTTCGCGC TGAACTCGAC GCTGTGGTTC TTCCTCACGT GGTTCCCGAC CTACCTCGTC
AAGTATCGCG GGATGGACTT CATCAAGTCG GGCTTCCTCG CGTCGCTGCC GTTCCTCGCC
GCGTTCGTCG GCGTGCTGTG CTCGGGTGTG CTGTCGGACT GGCTGATGCG GCGCGGCGCA
TCGCAGGGCT TCGCGCGCAA GCTGCCGATC ATCTCGGGCC TGCTGATCTC GACCTGCATC
ATCGGCGCGA ACTACGTGAG CTCCACCGGC TGGGTGATCG CGTTCATGAC GATCGCGTTC
TTCGGCAACG GCTTCGCATC GATCACGTGG TCGCTCGTGT CGGGGCTCGC ACCCGCGCGA
CTGCTCGGCC TCACGGGCGG CGTGTTCAAC CTGGTCGGTA ACCTGTCCGC GATCGCGACG
CCGATCGTGA TCGGGCTGCT GGTCGACGGC GCGGACTTCT CGCGCGCGAT CACCTACATC
GCCGCAATGG CGCTCGCGGG CAGCCTGTCG TACGGGCTGC TCGTCGGCAA GGTCGAGCGC
ATCGACGCGT AA
 
Protein sequence
MGPSASRTHA NPPQRPSAHT GTSSESATRA AAAAAPATPP SRKRLLILAL LFVTVVINYL 
DRSNLSIAAP ELFKELNIDP VHAGLVFSAF GWTYALMQIP GGWLVDKVSP RVLYAGALAL
WSAATLLLGF AGSFVGLIVL RLAVGALEAP AYPINNRAVT TWFPTRERAS AIGGYTSGQF
VGLAFLTPVL AWLQVHLGWH MVFVATGLAG IAWAAVWYAV YREPRALRGV NAAEIALIRD
GGGLVDLEDR IAARSDRAPS TWRDLGVVLG RRKLWGIYLG QFALNSTLWF FLTWFPTYLV
KYRGMDFIKS GFLASLPFLA AFVGVLCSGV LSDWLMRRGA SQGFARKLPI ISGLLISTCI
IGANYVSSTG WVIAFMTIAF FGNGFASITW SLVSGLAPAR LLGLTGGVFN LVGNLSAIAT
PIVIGLLVDG ADFSRAITYI AAMALAGSLS YGLLVGKVER IDA