Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_4766 |
Symbol | |
ID | 4096024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 2038688 |
End bp | 2040211 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638018052 |
Product | secretion protein HlyD |
Protein accession | YP_624618 |
Protein GI | 107027107 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAGGC AATCACTGAT GCGTGCGGTG TTGATCGCGT CCGCCGGCGC GGTGCTCGTC GGCGCAGGCT ATTTCGCGGG CGTTCGCCGT GCGACGAACG GCGCGGCGAC GGCCTCAGTG CCCGCCGCTG CGCCGTCGGG TATGCCGGCT CAGCAGGCCG CACGCAAGGT GCTGTACTGG CACGACCCGA TGGTGCCGAA CCAGCACTTC GACAAACCGG GCAAATCGCC GTTCATGGAC ATGCAGTTGC AGCCGGTCTA TGCGGACGAA GGCGGTGCCG CGGCAGGCAT CCGGATCGAT CCGGGCCTGC AGCAGAACCT CGGCATCCGC TATGCGACCG TGCGTCGGCA GCAGACGGCG GCCGGCTTCG ACGCGGTGGG CACCACGCAG TTCGACGAAG CGCGCGTGGA GGTCGTGCAG TCGCGCGTCA CGGGCTACAT CGACCATTTG TATGCACGCG CGCCGATGCA GCGCATCGCG AAGGGCGCGC CGGTCGCATC GTTGTTCGTG CCCGACTGGC TCGCGCCGCA GGAGGAATAT CTCGCGCTGA AGCGCGGCGG CATGGACGGC AACCTGCTCG ATGCGGCGCG CGCACGAATG CGCGCGCTGT CGATTCCGGA CGGGATGATC GCGAATCTCG ATCGTACCGG CCGCGCGCAG ACGCACGTCG TGCTGAGCGC GCCGGAGACG GGCGTCGTCA GCGAGTTGAA CGTGCGCGAC GGCGCGATGG TCGCGCCCGG CCAGACGCTC GCGAAGATCG CCGGGCTGGC GACGCTGTGG CTGGTCGTCG AGGTGCCGGA AGCGCTCGCT TTGAACGTGC AGCCGGGAAT GTCGGTCGAC GCGACGTTCG CGGGCGATCC GGCCCGGCAT TTCAGCGGCC GCATCCGCGA AGTGCTGCCC GGCATCAGCA CGGGCAGCCG CACGCTGCAG GCGCGTGTGG AGATCGACAA CGCATCGCTG AAGCTCACGC CCGGCATGCT GATGCGCGTG CGGGTCGCCG CGAAGGAGAC GGTGTCGCGC CTGCTCGTGC CGTCCGAGGC CGTGATCGCG ACCGGCCAGC GCACGATCGT CATCGCGAAG CTCGGCGACG GCCGGCTCCA GCCGGTGTCG GTGACGGTCG GCAACGACGT CGGCGGCGAC ACGGAAGTGC TCGGCGGGCT GAACGAAGGC GATACGGTTG TCGCATCGGG GCAGTTCCTG ATCGATTCGG AAGCCAGCCT GAAAAGCGTG CTGCCGCGGC TGGAGCGGGC GGCAGGCGCA AGCTCGGCCG CATCGTCCGC GACGGCAAGC GCGCCGGTCT ACGAAACCAC CGGCAAGGTG GAGAACGTCA CGGCCGACGA CATCACGTTC TCGCATCAGC CGGTGCCGGC GCTCGGCTGG GGCGCGATGA CGATGGCGTT CGGCAAGCCG TCGGCGCACG CGTTTCCGGA CGTGAAGCCG GGGCAGACCG TGCGTTTCGC GTTCACGCAG GCCGACGACG GCTACCGGCT GACGAAGGTC GAGCCGCAGG GAGGTGAGCG ATGA
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Protein sequence | MTRQSLMRAV LIASAGAVLV GAGYFAGVRR ATNGAATASV PAAAPSGMPA QQAARKVLYW HDPMVPNQHF DKPGKSPFMD MQLQPVYADE GGAAAGIRID PGLQQNLGIR YATVRRQQTA AGFDAVGTTQ FDEARVEVVQ SRVTGYIDHL YARAPMQRIA KGAPVASLFV PDWLAPQEEY LALKRGGMDG NLLDAARARM RALSIPDGMI ANLDRTGRAQ THVVLSAPET GVVSELNVRD GAMVAPGQTL AKIAGLATLW LVVEVPEALA LNVQPGMSVD ATFAGDPARH FSGRIREVLP GISTGSRTLQ ARVEIDNASL KLTPGMLMRV RVAAKETVSR LLVPSEAVIA TGQRTIVIAK LGDGRLQPVS VTVGNDVGGD TEVLGGLNEG DTVVASGQFL IDSEASLKSV LPRLERAAGA SSAASSATAS APVYETTGKV ENVTADDITF SHQPVPALGW GAMTMAFGKP SAHAFPDVKP GQTVRFAFTQ ADDGYRLTKV EPQGGER
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