Gene Bcen_4739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4739 
Symbol 
ID4094627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2009046 
End bp2010326 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content69% 
IMG OID638018025 
Productmajor facilitator transporter 
Protein accessionYP_624591 
Protein GI107027080 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.178474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGCAA ACGAGTGGGA TACCTCATAC GAGTGGAAGG CGGTGACGCT GCTGGCGCTC 
GGCTTCGGGC TGGTCGGCCT CGACCGCTGG CTCATCGCGC CGCTGTTTCC TTCGATCATG
AAGGACCTCG ACCTGACCGC ACAGGACGTC GGCAACTGCA TCGGCGTGCT CGGCCTGTCG
TGGGGCATCT TCGCGGCGCT GATGGGCGGT ATCTCGGACA AGATCGGCCG CCGGAAGGTG
CTGATACCGG CCATCATCGC GTTCTCGCTG CTGTCGGGCT TCTCGGGGCT CGCGGGCGGG
CTGCTCGGCC TGATGGCGAT TCGCGGGCTG ATGGGCGTCG CGGAAGGCTC GTTCTGTCCG
ACGAGTTTTG CGGCGACCGC CGATGCGTCG CATCCGCGGC GGCGCGGCCT GAACCTCGGC
CTGCAGCAAA GCGGCTTCGC GCTGTTCGGC CTCGCGCTGT CGCCGATCAT CGCCACGCAG
TTGCTCGGTT TCGTGTCGTG GCGCTGGGTC TTCGCGCTCG TGGCCGTGCC CGGCCTGATC
CTCGGCGCGA TCATGTTCTT CGTGATCCGC GAGCCGAAGG TTGCGAAGGA GGTCGCGTCG
GAGCACGCAC CCGCGTCGCT CGGGCATGTG CTCAGGAGCC GCAACATTCT CGTCGCGATG
GCCGCGCTGT GCTGTGCGAT GACGGGCGTC TTCGTGCTCG GCGCGCTGCT GCCGCTGTAC
CTGACCGATT ACCTGTCGCT CGGCACGCAG AAGATGGGGC TCGTCGTGTC CGCGATCGGC
TTCGGCGGCT TTCTCGGCCA GTTCGGGTTG CCCGGCCTGT CCGATCTGGT CGGCCGCCGC
ATCGCCAGCA TCGTCGGCTT CGCGGGCACG GCCGTGATGC TCTACGTGTT CCGCGGCCTC
GGCCCGCAGC CGCTCGCGCT GTTCGGTGTG CTGTTCGTCG CATCGTTCTT CACGCTCGGG
CTGGTGTCGC TGCTGTCCGG GCCGGTAGCG ACCGAGGCCG CGCCGGTCGG CCTCGTGTCG
ACGTCCATCG GCGTGGTGGT CGGCGTTGGC GAGATCTTCG GCGGCGGCAT CGCGCCGGCG
ATGGGCGGCT ACGTTGCCGC ACACTTTGGC ATCCAGAACA TTCTGTGGCT GCCGATGGGC
TCGGTGCTGC TCGGCATCGT GGTCAGCCTG CTGCTGAAGG AAACCGCACC GGCCGTGCTG
CAGCGCCGCG CGGCCGTGCA ACCGGGGCTG GCCGCCGGCG CGGCGAGCGC GAGCGGTTCG
CCGAGGTGCG CATCGACGTG A
 
Protein sequence
MQANEWDTSY EWKAVTLLAL GFGLVGLDRW LIAPLFPSIM KDLDLTAQDV GNCIGVLGLS 
WGIFAALMGG ISDKIGRRKV LIPAIIAFSL LSGFSGLAGG LLGLMAIRGL MGVAEGSFCP
TSFAATADAS HPRRRGLNLG LQQSGFALFG LALSPIIATQ LLGFVSWRWV FALVAVPGLI
LGAIMFFVIR EPKVAKEVAS EHAPASLGHV LRSRNILVAM AALCCAMTGV FVLGALLPLY
LTDYLSLGTQ KMGLVVSAIG FGGFLGQFGL PGLSDLVGRR IASIVGFAGT AVMLYVFRGL
GPQPLALFGV LFVASFFTLG LVSLLSGPVA TEAAPVGLVS TSIGVVVGVG EIFGGGIAPA
MGGYVAAHFG IQNILWLPMG SVLLGIVVSL LLKETAPAVL QRRAAVQPGL AAGAASASGS
PRCAST