Gene Bcen_4729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4729 
Symbol 
ID4094617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand+ 
Start bp1998840 
End bp1999820 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content70% 
IMG OID638018015 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_624581 
Protein GI107027070 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.264999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACAGC CTTCCCGCCC GCTCTCGACC GACGGCGCGC CAGCCGGGCT CGCGGCCTCC 
CCGGCCGCCG TCGACGCAAT GTCGCCGCGC GCCGTCGGCG GCAACGCGCC GCGCGCGCGT 
TGGCGCGCGT ACGCGCCGCT GTGGCTGATG TGCGCACCGG CCTTCGCGCT GTTCGCCGCG 
CTCGTGCTCG TGCCGCTCGC GATGACGTTC GTGCTGACGT TCTACCGCTT CGACCCGGCC 
ACCGGCCCGA TCGCCGCGTT CCAGTTCGGC AACTACGCGG AAGTGCTCGG CTCGTCGTAC 
TTCCACACGA TCTTCGCGCG CACGTTCGGC ATCGCCGCGC TGACGACCGC GATCTGCGTC 
GCGATCGGCA CGCCGGAAGC GTACGTGCTG TCGAAGATGC GCGACCCGTG GCGTTCGTTG 
TTCCTGCTCG CGATCCTCGC GCCGCTGCTC GTGTCGGTGG TCGTGCGCGC GTTCGGCTGG 
AGCATGCTGC TGAACACCAG CGGCCTCGTG AACCAGGCGC TCGCGCTCGT CGGCCTCGGG 
CCGTACAAGC TCGAATACAC GACGTTCGCG ATCGTGATCG CGCTGGTGCA CGTGATGCTG 
CCGTTCATGG TGATTCCGGT GTGGACCGCG CTGCAGCGGC TCGATCCGCA GACGGAACAC 
GCGGCGCTGT CGCTCGGCGC ATCGCCGTTC ACGACGCTGC GCCGCATCGT CGTGCCGCAA 
CTGATGCCGG GCGTGCTGTC GGGCAGCCTG ATGGTGTTCG GGCTGTCGGC GAGCGCGTTC 
GCGATTCCGG GCCTGCTCGG CGGACGGCGA TTGAAGGTCG CGGCCACGGC CGTCTACGAC 
GAATTCCTCG GCTCGCTGAA CTGGCCGCTC GGCGCGACGA TCGCCGTGCT GCTGCTCGCC 
GCGAACCTCG TCGTGATGCT CACTTACTAC CGCGTGCTCG AACGCCGCTA CGCGCGCAGC 
CTCGGAGGCG CATCGCGATG A
 
Protein sequence
MGQPSRPLST DGAPAGLAAS PAAVDAMSPR AVGGNAPRAR WRAYAPLWLM CAPAFALFAA 
LVLVPLAMTF VLTFYRFDPA TGPIAAFQFG NYAEVLGSSY FHTIFARTFG IAALTTAICV 
AIGTPEAYVL SKMRDPWRSL FLLAILAPLL VSVVVRAFGW SMLLNTSGLV NQALALVGLG 
PYKLEYTTFA IVIALVHVML PFMVIPVWTA LQRLDPQTEH AALSLGASPF TTLRRIVVPQ 
LMPGVLSGSL MVFGLSASAF AIPGLLGGRR LKVAATAVYD EFLGSLNWPL GATIAVLLLA 
ANLVVMLTYY RVLERRYARS LGGASR