| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4725 |
|---|
| Symbol | |
|---|
| ID | 4094983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 1995542 |
|---|
| End bp | 1996288 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638018012 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_624578 |
|---|
| Protein GI | 107027067 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGACTCA GGAACAAATC GGCGTTGATC ACGGGCGGCA CCAGCGGCAT CGGTCTGGCC
ACCGCGAAGC TGTTCATTTC AGAAGGCGCG CGTGTCGCGG TGACGGGGCG CGACGAACGC
GTATTCGAGC GCGTGAAGGC GGAGCTCGGC GAGCATGCGG TCGTGCTCAA GGGCGATGTG
CGGTCGCTCG ACGACATGCG CGCGATTGCC GGCGAGGTTA ACGAGAGGTT CGGCGGTCTC
GACGTGGTAT TCGCCAATGC CGGCTGGGCG TTTCCGTCCG CCGTCAACGA CATCGACGAC
ACGCTGTACA ACGACATCAT GGACGTCAAC GTCAAGGGCG TGGTGTTCAC GCTTCAAGCG
GCGCTGCCGT ACTTGCGCGA AGGTTCGTCG GTGATCCTCA ATACCTCGTT CGTCGCGCAG
ACTGGCAAGC ACGGCATCTC GCTGACCGCC GCGGCGAAGG CCGCCGTGCG CTCGCTGGCC
CGCAGCTGGT CGTACGAATT TCTCGACCGG AAAATCCGCT TCAACGCGAT CGCGCCCGGC
GCGATCGATA CGCCGCTGCT TTCGAAGTGG GGCAAGCCCG ACGAATGGGT ACGCGACCGC
AAGGCCGAAT TCGCCGAAGC GATTCCGGTG GGCCGCATGG GCCACGCCGA CGACATCGCG
TACGCGGCGC TCTATCTCGC CAGCGACGAA TCGTCGTTCG TCGTCGGCAC CGAGCTGGTG
GTCGATGGCG GGGCGTCGCA GCTCTGA
|
|---|
| Protein sequence | MRLRNKSALI TGGTSGIGLA TAKLFISEGA RVAVTGRDER VFERVKAELG EHAVVLKGDV
RSLDDMRAIA GEVNERFGGL DVVFANAGWA FPSAVNDIDD TLYNDIMDVN VKGVVFTLQA
ALPYLREGSS VILNTSFVAQ TGKHGISLTA AAKAAVRSLA RSWSYEFLDR KIRFNAIAPG
AIDTPLLSKW GKPDEWVRDR KAEFAEAIPV GRMGHADDIA YAALYLASDE SSFVVGTELV
VDGGASQL
|
|---|
| |