| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4722 |
|---|
| Symbol | |
|---|
| ID | 4094980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | + |
|---|
| Start bp | 1992936 |
|---|
| End bp | 1993883 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638018009 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_624575 |
|---|
| Protein GI | 107027064 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCGCA TTGGATTTTT CGTTTGCCGC GGCTACGACG CGCTCGATCT GGGCGGCCCG
TTGTCGGCCT TCAATCAGGT GGCCACGGCC GCCGGCCATA CGCCCTACGA TCTTCACGTC
ATCTCACCCA CCGGCGGCCC GATTCCCGGC AATACCGGCC TTTCGATCGA CACGAAGCCG
GTCGGACGGC GCGCGTTCGA CACCATCGTG TTCGTCGGCG GCGATATCGC GCCGATGCAG
ACTTCGGAAA ACATCACCGC GGCCAGCAAG CTGGCCGCCA AGGCGTCGCG AGTGGCCAGC
GTGTGTACGG GTGCATTTCT GCTCGCGGAA ACCGGCTCGC TCGACGGTTT GAGAGCTGCG
ACGCACTGGC GATACGCCGC GCAGTTGCAG TCACGCTTCC CTCGCACGCG GGTCGACGGC
GACAGTATCT ATGTGGTCGA TGGCCGCGTC TGGACATCGG CGGGCATCGC CTCCGGCATC
GACCTGGCGC TCGGCATGAT CGAACGGGAC ATGAGCGCGG AGATCGCGCG CGAGGTCTCC
CGGCTGCTGG TCGTGCCGTA TCGGCGACCC GGCGGGCAAT CGCAATTCTC GGCGATGTCG
CAGATGGAGC CGGAATCGGA TCGCATCCGC ATCGCACTGA ATTTCGCCCG CGAACACCTG
ACCGAAGCGT TGCCGGTCGA ACGGCTCGCC GATGCAGCGA GCTTGAGCGT GCGACAGTTC
GGACGCGCAT TTCGCCGGGA AACCGGTGAA ACGCCGGCGA GGGCGGTCGA GCGCTTGCGC
GTCGAAGCGG CGAGACTGCG CCTGCAGGGC GGCAGCGAAC CGATCGAACA GATTGCGCTG
GCAGTGGGAT TCACCGATCC GGAGCGGATG CGCCGAGCCT TCATCAAGCT GCTCGGACAC
CCGCCGCAAG CGATTCGGCG CGAGAGCAGG TCGAACGCAG CACGCTGA
|
|---|
| Protein sequence | MHRIGFFVCR GYDALDLGGP LSAFNQVATA AGHTPYDLHV ISPTGGPIPG NTGLSIDTKP
VGRRAFDTIV FVGGDIAPMQ TSENITAASK LAAKASRVAS VCTGAFLLAE TGSLDGLRAA
THWRYAAQLQ SRFPRTRVDG DSIYVVDGRV WTSAGIASGI DLALGMIERD MSAEIAREVS
RLLVVPYRRP GGQSQFSAMS QMEPESDRIR IALNFAREHL TEALPVERLA DAASLSVRQF
GRAFRRETGE TPARAVERLR VEAARLRLQG GSEPIEQIAL AVGFTDPERM RRAFIKLLGH
PPQAIRRESR SNAAR
|
|---|
| |