Gene Bcen_4704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4704 
Symbol 
ID4094228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp1973981 
End bp1975180 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content67% 
IMG OID638017991 
ProductBcr/CflA subfamily drug resistance transporter 
Protein accessionYP_624557 
Protein GI107027046 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.381793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGATC AAACCCGAAC CACGCCCGCA TGGGCTTACT CGCTGCCGTC GGCCTTGCTG 
CTGATGGCCC CTTTCGATCT CCTCGCGTCG CTGGCGATGG ACGTGTATCT GCCGGTGGTT
CCGGAGATGC CGTCGGCGCT GCACACGTCG CCCGCCATGG TGCAACTGAC GCTGAGCGTC
TACATGGTCG TCCTCGGCCT GGGCCAGTTG ATGTTCGGCC CGCTGTCGGA CCGGCTCGGA
CGTCGACCCG TGCTCCTGGG CGGTGCGCTA CTGTTCTCGG TGGCTTCGCT GGCGCTTGCA
ATGGCGGGCA GCGGCGGCGT GTTCGTCGCA TTGCGCCTGC TGCAGGCGCT GGGCGCGTCG
GCAGCGCTCG TGGCGACCTT TGCAACGGTG CGCGACGTGT ATGCCGACCG TCCGGAAGGC
AGCACCCTCT ACAGCCAGTT CGGGGCGATC CTCGCGTTCG TCCCGGCGCT CGGGCCGATG
CTTGGCGCAG GCATTGCGCA CGGTTTCGGA TGGCGCGCGA TCTTCATGAC CCTCGGCGGC
GCCGGATGTC TGGCGTTCTA CCGCGCGTTG TCGCGTTGGC ACGAAACCCG GCAGCAGGCC
GGCGGCAAGC CGCGGCAATC CGCCGTATCG ATCCTGCGCA GTCCTTCTTT CCTCGTCTAT
TCGCTCGGTT TCGGCACGTC CATGGGCGCT TTTTTCGTGT TCTTTTCGAT TGCGCCGCGT
GTGCTGGTCG GACAGGCCGG CTATTCCCGC ACCGAATTCA GCGTGGCGTT TGCCACCGTC
GCGATCGTGA TGATCGGTGC CGCGCGCTTT GCGCGATGGT TCGTGTCGAA CTGGGGGGGG
CCGGGCTGTT TCGTGCGCGG CGCCGGTGTC ATGATGGCCG GCGCAACCGC GCTGGCGGCG
TGCACGGCCC TGATGGCGCC GTCATTCGTC TCGTTCGTGA TGCCGATGTG GATCGTCGCG
ATCGGCATCG TGCTGATGTC GTCGGTGACG GCGAACGGCG CGCTTCGGGA TTTCGACGAC
GCGGCGGGGA CGGCGGTCGC GTTGTATTAC TGCGTGCAGA GCCTGATCGT CGGCGGGGCC
GGCACGTTCG TGACGCTGGT GCTGCCCGGC GATACGCCGT GGCCGCTGGC GGCGTTTTGT
TTCGTCGCGC CGACGGCATG CGTCCTCGCG CTCGCCGCAT TGAAGCGTAC GCGCGGATGA
 
Protein sequence
MPDQTRTTPA WAYSLPSALL LMAPFDLLAS LAMDVYLPVV PEMPSALHTS PAMVQLTLSV 
YMVVLGLGQL MFGPLSDRLG RRPVLLGGAL LFSVASLALA MAGSGGVFVA LRLLQALGAS
AALVATFATV RDVYADRPEG STLYSQFGAI LAFVPALGPM LGAGIAHGFG WRAIFMTLGG
AGCLAFYRAL SRWHETRQQA GGKPRQSAVS ILRSPSFLVY SLGFGTSMGA FFVFFSIAPR
VLVGQAGYSR TEFSVAFATV AIVMIGAARF ARWFVSNWGG PGCFVRGAGV MMAGATALAA
CTALMAPSFV SFVMPMWIVA IGIVLMSSVT ANGALRDFDD AAGTAVALYY CVQSLIVGGA
GTFVTLVLPG DTPWPLAAFC FVAPTACVLA LAALKRTRG