| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4685 |
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| Symbol | |
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| ID | 4094113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008061 |
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| Strand | - |
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| Start bp | 1951230 |
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| End bp | 1952699 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638017972 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_624538 |
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| Protein GI | 107027027 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR00999] Membrane Fusion Protein cluster 2 (function with RND porters)
[TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.160978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACGCA GCAGAATCTT CGTTATTGCG GCGGCCGTGC TCGGCGGCGC AGGGATCGTG
ATCGGCGCGC TCGCCGTCAC GCGGGGCGGC AGCAGCGCAT CGGCGCCGCC GGCCGCCGAT
GCCGCGCAGC CGGCCGAGGG CGCCGGTGCG CGCGGCGGTG TCGTGCTGAA GCGCGGCAAG
CTGTCCGTCG AGATCGTGAT GACGGAAAAG CCGGGCGACG CGCGGCTCGT CGTCTATCCG
TTCGTCGACG GCAAGCCGGT GGACAAGGGC GTGACCGTGT CCGGCACGCT GGTGCGGTAC
GACCGCACGC ACGAGCCGTT GCGATTCGAC GCGGCCGGCC AGAAGTTCGT GTCCGCGCAG
CCGATCGCGA AGCCGCACGT GTTCGATGCG ACGATCGACG TAAAGGCCGG CAACGACGCC
GCGTCGTTCC CGTTCGCGCG CGCCGACGGC GCGATCGCGC TGACCGACGC GCAACTGGCG
ACGTCGAAGA TCGCGCTCGC GAAAGCCGGC CCCGCACAGA TCGCGACGCC GTTCCAGCTT
CCCGGCGAAA TCAAGTTCAA CGAGGATCGC ACCGCGCACG TGGTGCCGCG CGTGGCCGGC
ATCGTCGAGC AGGTGTCGGT ATCGCTCGGC CAGAACGTCG CGAAAGGGCA GGTGCTCGCC
GTGATCGCGA GCACCGATCT GGCCGACCGC CGCAGCGAGC TGCTGACGGC CGAGCGCCGG
CTGTCGGGTG CGCGCGCAAC CTACGAACGC GAACGCACGC TGTGGAAGGA GCGCATTTCG
GCCGAGCAGG ATTACCAGCA GGCGCAGGTG CAGTTGCGCG AGGCCGAGAT CGCCGTGCAG
AACGCGCGGC AGAAGCTCGC CGCGCTGAAT GCGCCGGTCG GCGCGGGCGC GCTGAACCGT
TATGAACTGC GCGCGCCGTT CGCGGGCACG ATCGTCGAGA AGCATGCGAC GCCCGGCGAG
GCGATTGCCG CCGACGCGAG CATGTTCGTG ATCTCCGACC TGTCGACCGT GTGGGCCGAG
ATGGCGGTGC CCGCGCAGCG GCTCAACGAC GTGCGCGTCG GTCGCGATGC CACGGTGAGC
GCGACCGCGT TCGAATCGCG TTCGAGCGGC CCGATCGCGT ACGTGGGGTC GCTGCTCGGC
GAGCAGACGC GCACCGCGCC GGCGCGCGTC GTGCTGCCGA ACCCGGATCG CGTGTGGCGC
CCGGGAATGT TCGTGAACGT GTCGGTCGAC GCGGGCAGGC AGGCCGTGCC GCTCGCGGTC
GCGAGCGACG CGTTGCAGGA CGTCGACGGT GCGCCGTCGG TGTTCGTGCG CTCGCCGAAG
GGCTTCGTCG CGCAGGCGGT CGAAACCGGG CGGCGCGACG AACGCGCGAC CGAGGTGCTG
AAGGGGCTCA AGCCCGGCCA GGAATACGCG GTGTCGAACA GTTTCGTGCT GAAGGCGGAG
CTCGGCAAGG GGAGCGCGGA ACATGAATGA
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| Protein sequence | MSRSRIFVIA AAVLGGAGIV IGALAVTRGG SSASAPPAAD AAQPAEGAGA RGGVVLKRGK
LSVEIVMTEK PGDARLVVYP FVDGKPVDKG VTVSGTLVRY DRTHEPLRFD AAGQKFVSAQ
PIAKPHVFDA TIDVKAGNDA ASFPFARADG AIALTDAQLA TSKIALAKAG PAQIATPFQL
PGEIKFNEDR TAHVVPRVAG IVEQVSVSLG QNVAKGQVLA VIASTDLADR RSELLTAERR
LSGARATYER ERTLWKERIS AEQDYQQAQV QLREAEIAVQ NARQKLAALN APVGAGALNR
YELRAPFAGT IVEKHATPGE AIAADASMFV ISDLSTVWAE MAVPAQRLND VRVGRDATVS
ATAFESRSSG PIAYVGSLLG EQTRTAPARV VLPNPDRVWR PGMFVNVSVD AGRQAVPLAV
ASDALQDVDG APSVFVRSPK GFVAQAVETG RRDERATEVL KGLKPGQEYA VSNSFVLKAE
LGKGSAEHE
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