| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4683 |
|---|
| Symbol | |
|---|
| ID | 4094111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 1947206 |
|---|
| End bp | 1947892 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638017970 |
|---|
| Product | two component heavy metal response transcriptional regulator |
|---|
| Protein accession | YP_624536 |
|---|
| Protein GI | 107027025 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.222547 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATGCGAA TTCTGATTGT CGAGGATGAA CCGAAAACGG GCGCGTATCT GCGCAAGGGT
CTGACCGAGG CCGGCTACGT TGTCGACTGG GTCGAGGACG GCATCACGGG CCAGCACCAG
GCAGAAACGG AGGAGTACGA CCTGCTCGTG CTCGACGTGA TGCTGCCCGG GCAGGACGGC
TGGACGCTGC TGCAGAACCT GCGGCGCAGC AAATCGACGC CCGTGCTGTT CCTCACTGCC
CGTGACGACG TCGGCGATCG CGTGAAGGGG CTCGAACTCG GCGCGGACGA CTATCTCGCG
AAGCCGTTCG ACTTCGTCGA GCTGACCGCG CGCATCAAGT CGATTCTGCG GCGCGGCCAG
CCGCGCGATT CGAACACGCT GCGCGTGGCC GATCTCGAAC TTGACCTGAC CCGCCGCAAG
GCCACGCGGC AGGGCGACAC GATCCTGCTG ACCGCGAAGG AGTTCGCGCT GCTGTGGCTG
CTGATGCGTC GCGAAGGGGA GATCCTGCCG CGCGCGACGA TCGCGTCGCA GGTGTGGGAC
ATGAACTTCA ACAGCGACAC GAACGTCGTC GATTCGGCGA TCCGCCGGCT GCGCTCGAAG
ATCGACGACG CGTACGAACC GAAGCTGATC CATACGGTGC GCGGCATGGG CTACGTGCTC
GAAGCGCGCG GCGGCGCGGC CGCATGA
|
|---|
| Protein sequence | MMRILIVEDE PKTGAYLRKG LTEAGYVVDW VEDGITGQHQ AETEEYDLLV LDVMLPGQDG
WTLLQNLRRS KSTPVLFLTA RDDVGDRVKG LELGADDYLA KPFDFVELTA RIKSILRRGQ
PRDSNTLRVA DLELDLTRRK ATRQGDTILL TAKEFALLWL LMRREGEILP RATIASQVWD
MNFNSDTNVV DSAIRRLRSK IDDAYEPKLI HTVRGMGYVL EARGGAAA
|
|---|
| |