| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4669 |
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| Symbol | |
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| ID | 4093998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008061 |
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| Strand | - |
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| Start bp | 1932356 |
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| End bp | 1934170 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638017955 |
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| Product | regulator of RNA terminal phosphate cyclase |
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| Protein accession | YP_624522 |
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| Protein GI | 107027011 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4650] Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.186968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGCCAGC GGGACATCCG GCGTCTTTTA TTTAGCGAGG AGCGTGCCAG TGAGCGGCTG
GCGCTTCTGG AAATCTCTCA ACACATTGAA GTTAAAAGGG AATTATCTGT TTTGCAGTGT
CTGGCATCGA CGCTGTCGGC ACGTCACGAT TCTGCATATT CGATACAATT GGATCGCTTC
TTATCCCATG AGATAAACAT GCGCAAAACC GTTGCGATCG GTTTTCTCGG CACCGTGCTC
GACCAAGGCG GCCGCGCGCC GCGCCGTTAC CGCAAATGGC GGCCGACGAT TTCGCTGTGC
GAGCAGCCCG ACCTGCCGAT CGACCGGCTC GAACTGCTGC ATTCGCTGGA CTACACGCGT
CTCGCCAACC AGGTGCGGGA CGATCTCGCG CGCGTGTCGC CGCGAACCGA CGTGCGGCTC
ACGCCGGTCA CGATCCACGA TCCGTGGGAT TTCGAGGAGG TTTATGCGAC GCTGCACGAT
TACGCACGCG CGTACCCGTT CGACCTCGAA CACGAGGATT ACCTGATCCA CATCACGACC
GGCACGCACG TCGCGCAGAT CTGCTGGTTC CTGCTCGCGG AAGCGCGCTA TCTGCCCGCG
CGCCTCGTGC AGACCGGGCC GCCGCAGCGG ACCGACGAAG GGCCGAGCGG GCCGGGCACG
ATCTCGGTGA TCGATCTCGA CCTGTCGCGC TACAACCGGA TCGCGCAGCG CTTCACGCGC
GAGCGCGACG AAACGGTGTC GTTCCTGAAG GCCGGCATCG CGACGCGCAA CGCGCGCTTC
AATGCGCTGA TCGAGCAACT CGAGCGCGTG GCGGTGCGTT CGCGCGCGCC GATGCTGCTG
GTCGGGCCGA CGGGGGCCGG CAAGTCGTTT CTCGCGAAGC GCGTGTACGA GCTGAAGCGT
GGCCGGCATC GGCTCGCGGG GCCGTTCATC GAGATCAACT GCGCGACGCT GCGCGGCGAC
GCGGCGATGT CGACGCTGTT CGGTCACGTG AAGGGTGCGT TCACAGGGGC GCAGTCGGCG
CGGGCGGGGC TGCTGCGCGC GGCGGACGGC GGGCTGCTGT TTCTCGACGA GATCGGCGAA
CTCGGGCTCG ACGAACAGGC GATGCTGCTG AAGGCGATCG AGGAGAAGCG CTTCCTGCCG
GTCGGCGCGG ACGTCGAGGC GACCAGCGAT TTCGAACTGA TCGCGGGCAC GCACCGCGAT
CTGCGGCAGA TGGTGGCGGC CGGCACGTTC CGCGAGGACC TCTATGCGCG GATCAACCTC
TGGACCTATG AATTGCCGGG ACTGGCCGAG CGCCGTGAGG ACATCGAGCC GAACCTCGAA
TTCGAGCTCG ACCGTTTCGG TCGCGAGCAG GGCGAGCAGG TGCGGTTCAA CGTCGAGGCG
AAGCGGCGCT ATCTCGCGTT CGCGGCCTCG CCGCGCGCGA CGTGGGCCGG CAACTTCCGC
GAGCTGTCGG CGTCGGTCAC ACGGATGGCG ACGCTGGCCG ATGCGGGGCG CATTACCGAG
GCGCTCGCCG AACAGGAAGT CGAGCGGCTG ACGCGCACGT GGTCGTCGCC GGGTGGCGCG
AGTATGGCGG ACGCGTGCGT CGACGCGGTG TTCGGTGCGC GTGCGGCGGA ACTCGACCTG
TTCGATCGTG CGCAGCTCGA ACGCGTGCTC GACGTGTGCC GCACGTCGGC GAGCCTGTCG
GAAGCCGGGC GCACGCTGTT CGCGGTGTCG CGGCAGAGCA AGAAGCAGCC GAACGACGCG
GACCGGCTGC GCAAGTATCT CGCGCGGTTC GGGCTCGATT GGGACGGTGT GCGGCGCGCG
CTCGACGGTG TGTGA
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| Protein sequence | MGQRDIRRLL FSEERASERL ALLEISQHIE VKRELSVLQC LASTLSARHD SAYSIQLDRF
LSHEINMRKT VAIGFLGTVL DQGGRAPRRY RKWRPTISLC EQPDLPIDRL ELLHSLDYTR
LANQVRDDLA RVSPRTDVRL TPVTIHDPWD FEEVYATLHD YARAYPFDLE HEDYLIHITT
GTHVAQICWF LLAEARYLPA RLVQTGPPQR TDEGPSGPGT ISVIDLDLSR YNRIAQRFTR
ERDETVSFLK AGIATRNARF NALIEQLERV AVRSRAPMLL VGPTGAGKSF LAKRVYELKR
GRHRLAGPFI EINCATLRGD AAMSTLFGHV KGAFTGAQSA RAGLLRAADG GLLFLDEIGE
LGLDEQAMLL KAIEEKRFLP VGADVEATSD FELIAGTHRD LRQMVAAGTF REDLYARINL
WTYELPGLAE RREDIEPNLE FELDRFGREQ GEQVRFNVEA KRRYLAFAAS PRATWAGNFR
ELSASVTRMA TLADAGRITE ALAEQEVERL TRTWSSPGGA SMADACVDAV FGARAAELDL
FDRAQLERVL DVCRTSASLS EAGRTLFAVS RQSKKQPNDA DRLRKYLARF GLDWDGVRRA
LDGV
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