Gene Bcen_4621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4621 
Symbol 
ID4094299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp1881593 
End bp1882909 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content65% 
IMG OID638017907 
Productmajor facilitator transporter 
Protein accessionYP_624474 
Protein GI107026963 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGGAA CGCTTTCCCC GCGCGCCGCA CCTTCCGTCG ATGCGGCGGT GCAACAGCGC 
CGCCGCGCCA TCGTCGCGAC CGTGATCGGC AACGGCCTCG AATGGTTCGA CTTCACCGTC
TACAGCTTCT TCGCGGTGAT CATCGCGAAG CTGTTCTTCC CGACCGGCAA CGAACTGACG
TCCGTGCTGC TCACCGTCGC GACGTTCGGC GTGGGCTTCT TCATGCGGCC GGTGGGCGGC
ATCGTGCTGG GCGTCTATGC CGACAAGGTC GGACGCAAGG CAGCACTGTC GCTCACGATC
CTGCTGATGG CGGCTGGCAC CGCGCTGATC GGCATCGCGC CGACCTACGA ACAAGCCGGC
ATCGCCGCGC CGCTGATGAT CGTCGTCGCG CGGCTGCTGC AAGGCTTCTC GGCCGGCGGC
GAAATGGGCG GCGCCACCGC GTTCCTCACC GAATACGCGC CGCCGGAAAA GCGCGCGTAT
TACTCGAGCT GGATCCAGTC GAGCATCGGC TTCGCGGTGC TGCTCGGTGC GGCGACCGGC
ACGTTCGTCA CGACGTCGCT CGACACGCAG GCGCTGCATA GCTGGGGCTG GCGGCTGCCG
TTCCTGCTCG GGATCATCGT CGGGCCGGTC GGTTACTTCA TTCGCAGCCA TATCGACGAG
ACGCCCGCGT TCAGCGCCGT CGAATCGCAG GCGAAGGAAA GCTCGCCGCT GAAGGAAGTG
CTGCACACGT ATCCGCGCGA GACGTTCGCG AGTTTCTCGA TGGTGATCCT GTGGACCGTC
TGCACCTACG TGCTGCTGTT CTACATGCCG ACCTATTCCG TGCGCACGCT GCATCTGCCG
CAATCGACCG GTTTCACGGC CGGCATGGTC GGCGGGCTGA TGATCATGTG CTGCTCGCCG
ATCGTCGGGC GCCTCGCCGA CGCGTGGGGA CGGCGCGTGT TCCTGTCCGG CTCCGCGCTC
GCGATCCTCG TGCTCGCGTG GCCGATGTTC TCGTGGATCA ACCATGCGCC CGGGTTCGCG
TCGCTGATCG TGTTCCAGGC CGTGTTCGGC GTGCTGATCG CGACCTATAC GGGGCCGATC
CTCGCGGCGT TCGCGGAGCT GTTTCCGACC AAGGTACTGT CGACCGGATT ATCGGTTGCG
TACAACTTCG CGGTGACGAT CTTCGGCGGG TTCGCGCCGT TCCTGATAAC GTGGCTCATC
GCCCGGACCG GCAGCAACAT GGCGCCCGCG TTCTACGTGA TGCTCGCGGC GGCCGTCAGT
TTCGTCGGCA CGCGCTTCGT GAAGGATGCG AAGCTTGCGG CCGCAACGAC TCGATAA
 
Protein sequence
MQGTLSPRAA PSVDAAVQQR RRAIVATVIG NGLEWFDFTV YSFFAVIIAK LFFPTGNELT 
SVLLTVATFG VGFFMRPVGG IVLGVYADKV GRKAALSLTI LLMAAGTALI GIAPTYEQAG
IAAPLMIVVA RLLQGFSAGG EMGGATAFLT EYAPPEKRAY YSSWIQSSIG FAVLLGAATG
TFVTTSLDTQ ALHSWGWRLP FLLGIIVGPV GYFIRSHIDE TPAFSAVESQ AKESSPLKEV
LHTYPRETFA SFSMVILWTV CTYVLLFYMP TYSVRTLHLP QSTGFTAGMV GGLMIMCCSP
IVGRLADAWG RRVFLSGSAL AILVLAWPMF SWINHAPGFA SLIVFQAVFG VLIATYTGPI
LAAFAELFPT KVLSTGLSVA YNFAVTIFGG FAPFLITWLI ARTGSNMAPA FYVMLAAAVS
FVGTRFVKDA KLAAATTR