Gene Bcen_4572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4572 
Symbol 
ID4094386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp1827993 
End bp1830302 
Gene Length2310 bp 
Protein Length769 aa 
Translation table11 
GC content71% 
IMG OID638017859 
ProductCheA signal transduction histidine kinases 
Protein accessionYP_624426 
Protein GI107026915 
COG category[K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGCG ATGACGACCT GAGCCACCTG TCGCTGCTCG AACTGTATCG CGAGGAGACG 
CGCACGCAGA CCCAGGCGCT GTCGGAGCGG CTGCTCGCGC TCGAATCGGG CGAGCCCGAT
GCCGTCGCGC TCGAAGCGTG CATGCGCGCC GCGCACTCGC TGAAGGGCGC CGCGCGTATC
GTCGGCGTGC CGCTCGGCGT CGAGATCGCC GGGCGGATGG AAGAATGCTT CGTCGCCGCG
CAGGCCGGCA CGATCGCGCT GACGGCCACG CACGTCGACG TGCTGCTGGC CGGCGTCGAT
TTGCTGGTGC GGGTCGGCGA TCCGCAGGGG CAACCCGTGT CGCAGACCGA GATCGACGTG
TTCGCGGCGG CGCTGACGGG CGCCGACGGC GCGCAGACGA TACAGGCGCC GGCCGCCGCG
CCACCGCCCG TGCCGCCGTC GTTCGCGCCG TATCGCGATC ACGACGGCGC CGCGAACGAG
CCGGTCGGGG CCAGTGCCGC GGTGCCGCCG CTCGCCGTGT CGGGCGCGGT GCCCCATCCG
GCCCAGGCCG GCCGCGTGTC GGGCGCCGGC GCGATGCGCC GCGTGCGCGC CGATACGCTG
AACCGGCTGC TGAGCCTGTC CGGCGAATCG CTGGTCGAAT CGCGCTGGCT CAAGCCGTTC
GCCGAATCGA TGCTGCGCGT GAAGCGCGCG CAGCGCGACG CAGCCCGTTC GCTCGACCTG
ATGGTCGAGC AGTTCGCCGA CGATCTCGAC GCCGGCATGC TCGCGTCGAT GAACGAAGTG
CGGCACATGC TCAACGACCT GCAACGCTCG CTCGCCGAGC GCATGGACGA ATTCGACCGC
TTCGAGCGGC GCAGCACGCA TATCGCCGAG CAGTTGTACG ACGAGGCGCT GCAATGCCGG
ATGCGGCCGT TCGGCGATGC GACGCGCGCG TATCCGCGCA TCGTCCGCGA TCTCGCGCGC
TCGCTCGGCA AGCAGGTGCG TTTCTCGATC GTCGGTGAAG GCACGCAGGT CGATCGCGAC
ATCCTCGACC TGCTCGACGC GCCGCTCGGC CACCTGCTGC GCAACGCGAT CGACCACGGC
GTCGATTCGC CCGACGCGCG CCACGCGCGC GGCAAGCCGG CCGAGGCGAG CGTCACGCTC
GAGGCGCGCC ACAGCGCCGG CTCGCTGCTC GTCAGCGTGA TCGACGACGG GCCGGGGGTC
GACATGGACG CGCTGCGCGC GGCCGTCGTG CGCCAGCGCC TGACCGACGA CGAGACGGCC
GCGCGGTTGT CCGATCCGGA ATTGCTCGAA TTCCTGTTGC TGCCGGGCTT CTCGATGCGC
GATGCGGTGA CCGACGTATC GGGCCGCGGC GTCGGTCTCG ACGCGGTGCA GGAGATGGTG
CGCGGCGTGC GTGGCGCGGT GCGGATCTTC AACGAGCCGG GGGCCGGCAT GCGCTTCGTG
CTGCAGTTGC CGCTCACGCT GTCGGTGATC CGCAGCCTGC TCGTCGAAGT CGGCGGCGAA
CCCTATGCAT TCCCGCTCGC GCACGTGCGC CGCACGCTCG AACTCGCGCA CGACGACATC
GACGTGCTCG AAGGGCAGCC GCATTTTCCG TTCGACGGCC GGCGCGTGGG CCTCGTCGCC
GCGCACCAGC TGCTCGATGC GGGCGAACCG GACGTGGCGC GCGCGAGCAC GGCGGTCGTG
GTCGTCGGCG GCGAGCCGGA GTTGTACGGC GTCGCGGTCG ACCGTTTCCT CGGTGAGCGG
ATGCTCGTCG TGCAGCCGCT CGACAGCCGC CTGCACAAGA TCCAGAACAT CGCGGCCGGC
GCGTTGCTCG AGAACGGCGA CCCGGTGCTG ATCGTCGACG TCGAGGACCT GATCCGCTCG
GTCGACAAGC TCGTGCGCGG CGGCCAGCTC GCGCGGCTCA CGCGCGATCC GCAGCTCGCG
CTCGCCGACC GGCGCCGCCG CGTGCTCGTC GTCGACGATT CGCTGACGGT GCGCGAGCTC
GAACGCAAGC TGCTGGAAAA GCGCGGCTAC GACGTGACGG TCGCGGTCGA CGGGATGGAA
GGGTGGAACG CGGTGCGCAG CGATGCGTTC GATCTCGTCG TGACCGACGT CGACATGCCG
CGCATGGACG GCATCGAACT CGTCACGCTG ATCAAGGGCG ACCCGATGCT CAAGCGCGTG
CCGGTGATGA TCGTGTCGTA CAAGGATCGT GACGAGGATC GCCGCCGCGG GCTCGACGCC
GGCGCCGATT ACTACCTCGC GAAGAGCAGC TTCCACGACG AGGCGTTGCT CGATGCCGTG
CACGACCTGA TCGGAGATGC GCGCGGATGA
 
Protein sequence
MSGDDDLSHL SLLELYREET RTQTQALSER LLALESGEPD AVALEACMRA AHSLKGAARI 
VGVPLGVEIA GRMEECFVAA QAGTIALTAT HVDVLLAGVD LLVRVGDPQG QPVSQTEIDV
FAAALTGADG AQTIQAPAAA PPPVPPSFAP YRDHDGAANE PVGASAAVPP LAVSGAVPHP
AQAGRVSGAG AMRRVRADTL NRLLSLSGES LVESRWLKPF AESMLRVKRA QRDAARSLDL
MVEQFADDLD AGMLASMNEV RHMLNDLQRS LAERMDEFDR FERRSTHIAE QLYDEALQCR
MRPFGDATRA YPRIVRDLAR SLGKQVRFSI VGEGTQVDRD ILDLLDAPLG HLLRNAIDHG
VDSPDARHAR GKPAEASVTL EARHSAGSLL VSVIDDGPGV DMDALRAAVV RQRLTDDETA
ARLSDPELLE FLLLPGFSMR DAVTDVSGRG VGLDAVQEMV RGVRGAVRIF NEPGAGMRFV
LQLPLTLSVI RSLLVEVGGE PYAFPLAHVR RTLELAHDDI DVLEGQPHFP FDGRRVGLVA
AHQLLDAGEP DVARASTAVV VVGGEPELYG VAVDRFLGER MLVVQPLDSR LHKIQNIAAG
ALLENGDPVL IVDVEDLIRS VDKLVRGGQL ARLTRDPQLA LADRRRRVLV VDDSLTVREL
ERKLLEKRGY DVTVAVDGME GWNAVRSDAF DLVVTDVDMP RMDGIELVTL IKGDPMLKRV
PVMIVSYKDR DEDRRRGLDA GADYYLAKSS FHDEALLDAV HDLIGDARG