Gene Bcen_4553 details

Gene Information

• Locus tag: Bcen_4553
• ID: 4094426
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia AU 1054
• Kingdom: Bacteria
• Replicon accession: NC_008061
• Strand: +
• Start bp: 1807477
• End bp: 1809339
• Gene Length: 1863 bp
• Protein Length: 620 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 638017840
• Product: endonuclease/exonuclease/phosphatase
• Protein accession: YP_624407
• Protein GI: 107026896
• COG category: [R] General function prediction only
• COG ID: [COG2374] Predicted extracellular nuclease

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACGCC CGCTTCCCCT CTCTGCCGTT GCGCTGTTCG TGGTGTTGTC CGCCGTGCTG 
TCCGTGGCGC TCCTCGCCCC GCCGGCCGCC GCCGCTGCAC TGCCGGTCAG CAGCGGCTGC 
GGCGGTGCGG CCACGGCGAT TGCCGAGCTC CGGCGCGGCG GCGGGCCGTC GCCGCTCGCC 
GGGCAAACGA CGTCGATCGA AGCGGTCGTC ACCGCGGCGT TCGGCGGCGC CGACGGCCTG 
GGCGGCTTCT TCGTCCAGCA GGCCGACGCG CAGCGGCAGC GCCGGCCGGG CGTCCCGGAA 
GGGTTGTTCG TCTACGCACC GAACACGCGC GCGACGCCCG GCGACCTCGT GCATCTGACC 
GGCAAGGTCG ACGAGAAATA CGGCCGGACG CAATTCACGC TGACGAGCCG CATGGCCGTT 
TGCGCACGCG GGCAGACGGT CACACCGGCG ACGCTCACGC TGCCCGTCGC GTCGCTTGCC 
GTCCTGGCCG CGCACGAAGC CATGCGCGTA CGCCTGCCGC AAACGCTGAC GGTCAGCGAT 
ACCTACGCAC TCGGTCGCTA CGGCAGCATC GTGCTGAGCA ACGGCCGGCT GCGCGTGCCG 
ACCCAGGTCG CGCCGCCGGC CGACGCTGCC GCGCAGGCCG CGGCCAACGC ACTGAACCGC 
ATCGTGCTCG ACGACGGCTC GAGCCGCCGC GACCCGGCGA CCGTCCGCTA TCCGCCGCCC 
GCGCTAAGCG CCGCCAACAC GCTGCGCGCG GGCACCACCG TACGCGGCGT CGAAGGCGTG 
CTCGAATGGC GCTACGGCGC ATGGCGGCTG CAACCGGTGG CCGGCGCGGC GCCCGTGTTC 
GATGCCGCGG CGAACCCGCG TCCCGCGCCA CCGGCCCGAC ATCCTGATGC CGACGTGCGC 
ATCGTGTCGT TCAATGTCTT CAATTATTTC AACGGCGACG GCCATGGCGG CGGATTCGAC 
GCGCCGGGCA ACCGCGGCGC GAAAACGCCC GCCGCGTTCG CGCGGCAGGA AGCGAAGATC 
GTCGCGTCGT TGCGCGCGCT GCGCGCCGAC GTGATCGGGC TGATGGAAAT CGCGAACAAC 
GGCCACGGCG ACACGAGCGC CATCCGTCGG CTCGCCGCGC AACTCGGCGA CGGCTGGCGC 
GCGGTCGATC CCGGCACGGC GCGGCTGGGC CGCGACGCGA TCGCGGTCGC GCTGCTGTAC 
GACAGCCGCA CGGTCGAGCC GGTCGGGCGC GCCGTCACCG TCGCACTCGG CGGCCGCCAC 
CGCCCGCCGC TCGCGCAGAC GTTCCGGCGC ATCGACGGCA CACGCACGTT CACCGTCGCG 
GTCAATCACC TGAAGTCGAA GAACTGCCCG CATGCGAGCG GCGCCAATCT CGACCAGTCC 
GACGGCCAGG GCTGCTGGAA CGCGGCGCGC ACGCGGGCGG CCGCACGCGT CGCCGACTGG 
CTCGCCACCT CGCCGACGGG CATCGCGGCC GACGGCGTGC TGCTGATCGG CGATCTGAAC 
AGTTATGCGA AGGAAGACCC GCTTCGCACG CTCGAAGCGC GCGGCTACGC GAACCTGGTT 
GTGCGCTTCG TCGGCGATGC TGCGTACAGC TACGTATTTC GCGGCGAAGC CGGCAATCTC 
GACCATGCGC TTGCCACGCC GGCGCTCGCC GCGCGCGTGA AGGCCGTGCG GTTCTGGCAC 
ATCAACGCGG ACGAACCGGT GGTCTTGCAA CCCGTGCCCG ATTACAAAAC GTCCGCGCAA 
CGATCGGCTT ATTACGCACC CGACGCCTAC CGCTCGTCGG ACCACGATCC CGTCGTCATC 
GACGTCGCGC TGGACGACGC CGCCACGCAA CCGGCACCGG GCACAAATCG TGCGCATCGA 
TGA 

 

Protein sequence

MSRPLPLSAV ALFVVLSAVL SVALLAPPAA AAALPVSSGC GGAATAIAEL RRGGGPSPLA 
GQTTSIEAVV TAAFGGADGL GGFFVQQADA QRQRRPGVPE GLFVYAPNTR ATPGDLVHLT 
GKVDEKYGRT QFTLTSRMAV CARGQTVTPA TLTLPVASLA VLAAHEAMRV RLPQTLTVSD 
TYALGRYGSI VLSNGRLRVP TQVAPPADAA AQAAANALNR IVLDDGSSRR DPATVRYPPP 
ALSAANTLRA GTTVRGVEGV LEWRYGAWRL QPVAGAAPVF DAAANPRPAP PARHPDADVR 
IVSFNVFNYF NGDGHGGGFD APGNRGAKTP AAFARQEAKI VASLRALRAD VIGLMEIANN 
GHGDTSAIRR LAAQLGDGWR AVDPGTARLG RDAIAVALLY DSRTVEPVGR AVTVALGGRH 
RPPLAQTFRR IDGTRTFTVA VNHLKSKNCP HASGANLDQS DGQGCWNAAR TRAAARVADW 
LATSPTGIAA DGVLLIGDLN SYAKEDPLRT LEARGYANLV VRFVGDAAYS YVFRGEAGNL 
DHALATPALA ARVKAVRFWH INADEPVVLQ PVPDYKTSAQ RSAYYAPDAY RSSDHDPVVI 
DVALDDAATQ PAPGTNRAHR