| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4540 |
|---|
| Symbol | |
|---|
| ID | 4094413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 1793616 |
|---|
| End bp | 1794779 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638017827 |
|---|
| Product | polysaccharide export protein |
|---|
| Protein accession | YP_624394 |
|---|
| Protein GI | 107026883 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0169971 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCCGG TGGCGCTTGC CGTCGCGCTG ACGACTTTCC TGTCAGCCTG TGCAACCGCG
CCCGGCAACT ACCTCGACTC GTCGAACCTG AAGGACGAAG GCCGGCAGGA AGCGGCCGAA
ACCTATCCGG TTCATTACAT CGACGCCAAA GTGGTGATGG ACCAGCTGCA GAAAGCGCAG
GTCGATCATC CGCTGCCGCC CGGGCGCTAT ACCGATCCGT CGCAGTACAC GTATCGCGTC
GGCCCGCAGG ACATCCTCGG CGTCACCGTG TGGGACCACC CGGAGCTGAC GACGCCGCAG
GGCCAGTCGT TCTCGAGCGG CGGCAACACG ACGCAATCGG TCGCGGGCGC GCTGCAGCAG
CCGTATACGA CCGCGCTGCC GGGCCAGGCC GATCCGTACG GCCAGACGGT CGCCGCCGAC
GGCACGATCT TCTTCCCGTT CGTCGGCCGC ATCCGCGTGG CGGGCAAGAC GGTCGCGCAG
ATCCGCGACG AGATGGCGTC CAGCCTGTCG CGCTACGTGA AGAATCCGCA GCTCGACGTG
CGCGTGCTGT CGTTCCGCAG CCAGAAGGTA CAGGTGACGG GCGAGGTGAA GCAGCCGGGC
CCGCTCGCGG TGAGCGACGT GCCGCTCACG CTCGTCGACG CGATCTCGCG CTCCGGCGGC
TCGACCGCCG AGGCCGACCT GCAGCGCGTG CGCCTGACGC GCGACGGCAA GCTCTACACG
CTCGACGCGA ACGGCGTGCT CGATCGCGGC GAAGTGAAGC AGAACGTGAT GCTGCAGCCG
GGCGACATCG TCAACGTGCC GGACCGCAGC GACAGCCGCG TGTTCATCAT GGGCGAGGTC
AAGACGCCGG TCACGGTGCC GATGCTCAAG GGCAAGCTGA CCATCGCCGA TGCGCTGACC
GCGGGCGGCG GGATTCTCGA CACCGACGCG AACCCGCGCA AGATCTACGT GATGCGCGGG
ATGCGCGACA ACCCGACGAA GCCCGAGGTG TACCGCCTCG ACATGACGCA GCCCGATGCG
CTGATGCTGT CGAGCCGCTT CCCGCTTCAA CCGCTCGACG TCGTCTACGT CAGCACGGCC
GGTTCGGTGC AGTTCAACCG TGTGCTGCAG CAGGTGCTGC CGACGATCCA GACGATCTTC
TACATGCGGC AAATCACGCG CTGA
|
|---|
| Protein sequence | MRPVALAVAL TTFLSACATA PGNYLDSSNL KDEGRQEAAE TYPVHYIDAK VVMDQLQKAQ
VDHPLPPGRY TDPSQYTYRV GPQDILGVTV WDHPELTTPQ GQSFSSGGNT TQSVAGALQQ
PYTTALPGQA DPYGQTVAAD GTIFFPFVGR IRVAGKTVAQ IRDEMASSLS RYVKNPQLDV
RVLSFRSQKV QVTGEVKQPG PLAVSDVPLT LVDAISRSGG STAEADLQRV RLTRDGKLYT
LDANGVLDRG EVKQNVMLQP GDIVNVPDRS DSRVFIMGEV KTPVTVPMLK GKLTIADALT
AGGGILDTDA NPRKIYVMRG MRDNPTKPEV YRLDMTQPDA LMLSSRFPLQ PLDVVYVSTA
GSVQFNRVLQ QVLPTIQTIF YMRQITR
|
|---|
| |