Gene Bcen_4539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4539 
Symbol 
ID4094412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp1791340 
End bp1793565 
Gene Length2226 bp 
Protein Length741 aa 
Translation table11 
GC content68% 
IMG OID638017826 
Productprotein-tyrosine kinase 
Protein accessionYP_624393 
Protein GI107026882 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis 
TIGRFAM ID[TIGR01005] exopolysaccharide transport protein family
[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.267128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAACA CGCAAGCGAA ACACTCCTAC GCGGACCTGA CCGCGAAGAC CGAGGAAGAG 
GACTTCGTTC TCGGCCAGTT GCTCCAGGTG ATCATGGACG ACATCTGGCT GCTGATCGGC
ATCGCGGTGA CGGTCGTCGC GCTCGCCGGC CTCTACTGCT TCATCGCGAA GCCGGTCTAC
CAGGCGGACG TGCACGTGCG GGTCGAGGGC AACGACAACA CGTCGCAGGC GCTCACGCAG
ACGCAGACGG GCGCGTCGAT CAACAGCGGC CCGCAGCAGG CGCCGACCGA CGCGGAAATC
GAGATCATCA AGAGCCGCGG TGTCGTCACG CCGGTCGTCG AGCAGTTCAA GCTGAACTTC
TCGGTCGCGC CGAAGACGCT GCCGGTGCTC GGCAGCCTCG CCGCGCGCCT CGCGACGCCC
GGCGAGCCGT CGCGGCCGTG GCTCGGCCTG AAGTCGTATG CGTGGGGCGG CGAAGTCGCC
GACGTCGACT CGATCAGCGT CGTGCCGGCG CTCGAAGGCA AGAAGCTGAC GCTGACGGCC
GGCCCGAACG GCACCTATTC GCTGGTCGAC GAGAACGGCA CGCGGCTGCT GGCGGGCCGT
GTCGACGAAG CCGCGCAGGG CGGCGGCGTG ACGCTGCTCG TGCGGAAGCT GGTCGCGCGC
CCCGGCACGC AGTTCACGGT GGTGCGCTAC AACGATCTCG ACGCGATCAG CGGCTTCCAG
GCCGGTATCC AGGTGAGCGA GCAGGGCAAG CAGACGGGCG TCGTGCAGAT CTCGCTCGAA
GGCAAGGACC CGGACCAGAC CGCCGCGATC GCGAACGCGC TCGCGCAGTC GTACCTGAAC
CAGCACGTGG TCGCGAAGCA GGCGGAAGCG ACCAAGATGC TCGACTTCCT GAAGGGCGAG
GAGCCGCGCC TGAAGGCCGA CCTCGAACGC GCGGAAGCCG CGCTCACGCA ATACCAGCGC
ACGTCGGGCT CGATCAACGC GAGCGACGAG GCGAAGGTCT ACCTCGAAGG CAGCGTGCAG
TACGAACAGC AGATCGCCGC GCAGCGGCTG CAGCTCGCGT CGCTCGCGCA GCGCTTCACC
GATTCGCATC CGATGGTGAT CGCCGCGAAG CAGCAGCTCG CGGAGCTGCA GGGCGAGAAG
GACAAGTTCA GCAACCGCTT CCGCAGCCTG CCGGCGACCG AGGTGAAGGC GGTCCAGCTC
CAGCGCGACG CGAAGGTCGC CGAGGACATC TACGTGCTGC TGCTGAACCG CGTGCAGGAA
CTGTCGGTGC AGAAGGCCGG CACGGGCGGC AACATCCACC TGATCGATTC GGCGCTGCGT
CCGGGCGCGC CGGTCAAGCC GAAGAAGGTG CTGATCCTGT CGGCCGCCGT GTTCCTCGGG
CTGATCCTCG GCACGGGCGT CGTGTTCCTG CGCCGCAACC TGTTCCAGGG CATCGAGGAC
CCGGACCGCA TCGAGCGCAC GTTCAACCTG CCGCTGTACG GGCTGGTGCC GCAAAGCGCC
GAGCAGGTGA AGCTCGACGC GGCGGCGGAG AAGGGCGGCA GCCGTGCGCG GCCGATCCTC
GCGAGCCTGC GTCCGAAGGA CCTGAGCGTC GAGAGCATGC GCAGCCTGCG CACCGCGATG
CAGTTCGCGA TGATGGACGC GAAGAACCGC GTGATCGTGC TGACCGGCCC GACGCCGGGC
ATCGGCAAGA GCTTCCTGAC GGTCAACCTC GCGGTGCTGC TCGCGCATTC GGGCAAGCGC
GTGCTGCTGA TCGACGCCGA CATGCGCCGC GGGATGCTCG ACCGCTACTT CGGTCTCACC
GTGCAGCCGG GCCTGTCCGA GCTGCTGAGC GATCAGTCGC CGCTCGAGGA AGCGATCCGC
GAGACGCCGG TGCAGGGCCT GTCGTTCATC GCGGCCGGCA CGCGCCCGCC GAATCCGTCG
GAACTGCTGA TGTCGACGCG CCTGCCGCAA TACCTCGAAG GGCTCGGCAA GCGCTACGAC
GTCGTGCTGA TCGATTCGCC GCCGGTGCTG GCGGTGACCG ACGCGACCAT CATCGGCCGC
ATGGCCGGCT CGACGTTCCT CGTGTTGCGC TCGGGCATGC ATACCGAAGG CGAGATCGCC
GACGCGATCA AGCGCCTGCG CACCGCGGGC GTCGATCTGG AGGGCGGGAT CTTCAATGGC
GTGCCGCCGA AGGCGCGCGG CTACGGCCGC GGCTATGCGG CCGTACACGA ATACCTGAGC
GCTTGA
 
Protein sequence
MVNTQAKHSY ADLTAKTEEE DFVLGQLLQV IMDDIWLLIG IAVTVVALAG LYCFIAKPVY 
QADVHVRVEG NDNTSQALTQ TQTGASINSG PQQAPTDAEI EIIKSRGVVT PVVEQFKLNF
SVAPKTLPVL GSLAARLATP GEPSRPWLGL KSYAWGGEVA DVDSISVVPA LEGKKLTLTA
GPNGTYSLVD ENGTRLLAGR VDEAAQGGGV TLLVRKLVAR PGTQFTVVRY NDLDAISGFQ
AGIQVSEQGK QTGVVQISLE GKDPDQTAAI ANALAQSYLN QHVVAKQAEA TKMLDFLKGE
EPRLKADLER AEAALTQYQR TSGSINASDE AKVYLEGSVQ YEQQIAAQRL QLASLAQRFT
DSHPMVIAAK QQLAELQGEK DKFSNRFRSL PATEVKAVQL QRDAKVAEDI YVLLLNRVQE
LSVQKAGTGG NIHLIDSALR PGAPVKPKKV LILSAAVFLG LILGTGVVFL RRNLFQGIED
PDRIERTFNL PLYGLVPQSA EQVKLDAAAE KGGSRARPIL ASLRPKDLSV ESMRSLRTAM
QFAMMDAKNR VIVLTGPTPG IGKSFLTVNL AVLLAHSGKR VLLIDADMRR GMLDRYFGLT
VQPGLSELLS DQSPLEEAIR ETPVQGLSFI AAGTRPPNPS ELLMSTRLPQ YLEGLGKRYD
VVLIDSPPVL AVTDATIIGR MAGSTFLVLR SGMHTEGEIA DAIKRLRTAG VDLEGGIFNG
VPPKARGYGR GYAAVHEYLS A