| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4538 |
|---|
| Symbol | |
|---|
| ID | 4094411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 1790318 |
|---|
| End bp | 1791277 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638017825 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_624392 |
|---|
| Protein GI | 107026881 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTT CCGTGCTCGT TCCGACCTAC CGGCGTCCCG CCGACCTCGC GCGCTGCCTG
CTGGCGCTGC AGCGGCAGCA GCGGCTGCCC GACGAGGTGA TCGTCGTCGC GCGCCCGGAG
GACGACGCCA CGCACGAACG GCTCGCCGAT CCGGCGGTCG GCGGCGCGCT GCCGCTGCGC
ATCGTGCCGG TCGACGTGGG GGGGCAGGTC GCCGCGCTGA ACAAGGGGCT CGACTCGGCG
AACGGCGACA TCGTCGCGAT CACCGACGAT GATGCGGCGC CGCGCCCCGA CTGGCTTGCG
CGCATCGAAG CCGTATTCCA GGCCGATCCG CGCGTGGGCG CGGTCGGCGG ACGCGACTGG
GTGCACGAGA AGGGCCGCCT GCTCGACGAA TCGCGCGAGC TCGTCGGCCA GCTCACGCTG
TCCGGCAAGA TCATCGGCAA TCATCACCTC GGCGTGGGCG GCGCGCGCGA AGTCGACATG
CTCAAGGGCG CAAACATGAG CTATCGACGC GCGGCGATCG AACGGCTGCG CTTCGACACG
CGGCTGCGCG GCGCCGGCGC GCAGATGCAC AACGACATGG GCTTCAGCAT GCACGTGCAG
CGCGAAGGCT GGAAGCTCGT CTACGACCCG GCGATCGCGG TCGATCATTT TCCGGCCGAG
CGCTTCGACG ACGATCGGCG CGATGCCGCG TCGCTGAACG CGATCAGCAA CGGCGCGCAC
AACCTGCACC TGATCCTGCG CGAGCATCTG TCGCCGCTCC GGCGCGAGAT CGCGTGGTGG
TGGTGGGCGC TGGTCGGCAC GCGCGTCTAC CCGGGCTTCG CGCACCTGCT GCTGGCGCTG
CCGACCGCGC GGCGCGCCCG CGTGCTCGCG CACTGGCGCG CGGTGCGCCG CGGCGCCCGC
GATGCGCGTC GCACCAACCT TGCCCCCCAC CGTGCGGCGA TGCCGCCGGT GACGTCTTGA
|
|---|
| Protein sequence | MKISVLVPTY RRPADLARCL LALQRQQRLP DEVIVVARPE DDATHERLAD PAVGGALPLR
IVPVDVGGQV AALNKGLDSA NGDIVAITDD DAAPRPDWLA RIEAVFQADP RVGAVGGRDW
VHEKGRLLDE SRELVGQLTL SGKIIGNHHL GVGGAREVDM LKGANMSYRR AAIERLRFDT
RLRGAGAQMH NDMGFSMHVQ REGWKLVYDP AIAVDHFPAE RFDDDRRDAA SLNAISNGAH
NLHLILREHL SPLRREIAWW WWALVGTRVY PGFAHLLLAL PTARRARVLA HWRAVRRGAR
DARRTNLAPH RAAMPPVTS
|
|---|
| |