| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4487 |
|---|
| Symbol | |
|---|
| ID | 4094549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 1738729 |
|---|
| End bp | 1739613 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638017775 |
|---|
| Product | polyprenyl synthetase |
|---|
| Protein accession | YP_624342 |
|---|
| Protein GI | 107026831 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATTCG AACAATGGAT GCGGTCCGTG CTTGACCGTG TCGAGGACGC ACTCGGCCAC
TATCTGCCGG CTGAAACCGC GATGCCCGCG AAACTTCACG AGGCGATGCG CTACGCGGTC
CTCGGTGGCG GCAAGCGCGT TCGCCCGCTG CTGTGCCATG CGGCAGGCGA GCTGACCGGT
GCGACGGAGG CGGCACGCAA CGCCGCGGCG GCGGCGCTGG AGATGATCCA CGTCTACTCG
CTCGTGCACG ACGACATGCC GTGCATGGAC GACGACGCGC TGCGTCGCGG CAAGCCGACC
GTGCACGTGC AGTACGACGA ACCGACGGCG CTGCTGGTCG GTGACGCGCT GCAGTCGCAG
GCGTTCGTGG CGTTGACCGA TGCCGAGGCG CTGTCGCCGG TGCAGCAGGC GGCGCTCGTG
CGCGAGCTGG CGCTGGCGAG CGGCTCGATC GGCATGGCTG GCGGGCAGGC GATCGACCTG
GCGAGCGTCG GCCTGAAGCT GACGCGCGAA CAGCTCGAAA CGATGCACCG GATGAAGACG
GGCGCATTGC TGCGCGCGGC CGTGCGGATG GGCGCGCTGG CCGGCGAGAC GCCGTCGGCG
GAAACGATGG CCGCGCTGGA TGTTTACGCG GGGGCCGTGG GTCTGGCCTT CCAGGTCGTC
GACGACATTC TCGACGTCAC GACCGATTCG GCGACGCTCG GCAAGACGGC CGGCAAGGAC
GCGGCGAACG ACAAGCCGAC CTATGTATCG ATCCTCGGTC TCGAGGCGTC GCGCGAGCTG
GCAGCGCAGC TGCGCGCCGA AGCGCACGAC GCGCTGAAAC CGTTCGGCGC ACGCGCACAG
CGTCTGGCCG AACTTGCCGA CCTGGTAGTG AACCGGGTCA GCTGA
|
|---|
| Protein sequence | MTFEQWMRSV LDRVEDALGH YLPAETAMPA KLHEAMRYAV LGGGKRVRPL LCHAAGELTG
ATEAARNAAA AALEMIHVYS LVHDDMPCMD DDALRRGKPT VHVQYDEPTA LLVGDALQSQ
AFVALTDAEA LSPVQQAALV RELALASGSI GMAGGQAIDL ASVGLKLTRE QLETMHRMKT
GALLRAAVRM GALAGETPSA ETMAALDVYA GAVGLAFQVV DDILDVTTDS ATLGKTAGKD
AANDKPTYVS ILGLEASREL AAQLRAEAHD ALKPFGARAQ RLAELADLVV NRVS
|
|---|
| |