Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_4478 |
Symbol | |
ID | 4094654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 1724381 |
End bp | 1725847 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638017765 |
Product | GntR family transcriptional regulator |
Protein accession | YP_624333 |
Protein GI | 107026822 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.728897 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTCG CGCTGCTCAT CTCGTCGCTT GCCAGACAGG ACGGCGCGAC AACGCATAGT CGGCAGGAAG CCCTCTACCG GAGCCTGCGC AACATGCTGC TGGACGGGCA CCTCCCGCCC GGCACGCGGC TCGCGTCGAC GCGCGTGCTC GCGGCCGAGC TGGGCATCGC GCGCAATTCC GCGGTCTATG CGTACGAGCG TCTTGCCGAG GAAGGCTTCG TGGCGGCCAC GCGCAACGGC ACGATCACGC TATGGGACGG ATGCGACCGC TCGAACGTCG CAAAGGAAGA CGGCCCCGCG CCAGTTCACT TGTCGGCGCG CGTGCACGGG CTGGAGAACG CCGACCCCGA GCCCGAACGC ATGCTGCCGT TCGTTCCCGG CCTGCCGTCC CTCGACGAAT TCCCGGTTGC CCAGTGGCGT CGTTGCATCG AGCGCGCATG GAAGACCATC ACGCCCGCCC GGCTGGCGTA CGGCCCGGTC GAAGGGCTGC CCGAACTGCG GCGCGCGGTC GCCGCATACA TCCGCGTGTC GCGCGGTGTG CGCTGCGACA CGGGCCAGGT GTTCATCACC GACGGCACGC AGAGCAGCCT CGAACTCTGC GCGCGCATGC TGGCGAATCC CGGGGAATAC GGCTGGCTCG AGAACCCTTG CTACAACGGC GCGAGAACCG CGTTCCGGTC GACCGGCCTG AATCCCGTGC CGATCGAGGT CGATCGCGAG GGCATGGCGC CGACCCACGC GCAGTGGCGC ACCCACCCGC CCCGGCTGAT CTATACGACA CCGTCGCACC AGTACCCGCT CGGCGCGCTG ATGAGCCCGC GGCGCCGCGC GGCGCTCGTC GAGCATGCCC GTGCATGCGG CGCGTGGATC ATCGAGGACG ACTACGACAG CGAGTTCCGT CACGGTGGCC AGCCGCTGCC CGCGATCCAG GGCCTGCATG CGGATGCACC GGTATGCTAT CTCGGCACGT TCAGCAAGAC GATGTTTCCG GCCCTGCGGC TCGGCTTCAT GGTGGTGCCG CCGGTGCTGG TCGACCGCTT CACGCGCACG CTGCGCGAAC TCGTCCATCG CGGCCACTCG GCCGACCAGT TGGCGATGGC AGAATTCATC GATACCGGCC TGTTTGCGCG GCACCTGCGG AAGATGCGGG CGCTCTATGC CGAGCGGCGC GGCGGCCTCG AAGCGGCGCT CGCCCGCCAT CTCGGCACAT CGCTGAGCGT GCGGGAAAGC CCCGGCGGCA TGCATCTTTC CGCGGATCTC GCGGCGCCGC TGCACGATAC CGACGTCGCG CGCACGGCCG CCGCCCGCGG CTTGCTGCTG CAACCGCTGA GCAGCTATTG CATCGGCGAC GGCCGCCGCT ACAACGGCTT CGTGCTCGGC TATTCAGGGC TGAGCGATGC GACGATCGAG ACAGCGGCGA TGCAGTTTGC CGACGTCATC GAGCAGCACC GCCGCGCGCG GCACTGA
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Protein sequence | MDLALLISSL ARQDGATTHS RQEALYRSLR NMLLDGHLPP GTRLASTRVL AAELGIARNS AVYAYERLAE EGFVAATRNG TITLWDGCDR SNVAKEDGPA PVHLSARVHG LENADPEPER MLPFVPGLPS LDEFPVAQWR RCIERAWKTI TPARLAYGPV EGLPELRRAV AAYIRVSRGV RCDTGQVFIT DGTQSSLELC ARMLANPGEY GWLENPCYNG ARTAFRSTGL NPVPIEVDRE GMAPTHAQWR THPPRLIYTT PSHQYPLGAL MSPRRRAALV EHARACGAWI IEDDYDSEFR HGGQPLPAIQ GLHADAPVCY LGTFSKTMFP ALRLGFMVVP PVLVDRFTRT LRELVHRGHS ADQLAMAEFI DTGLFARHLR KMRALYAERR GGLEAALARH LGTSLSVRES PGGMHLSADL AAPLHDTDVA RTAAARGLLL QPLSSYCIGD GRRYNGFVLG YSGLSDATIE TAAMQFADVI EQHRRARH
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