Gene Bcen_4472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4472 
Symbol 
ID4094648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp1715981 
End bp1717411 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content70% 
IMG OID638017759 
ProductRND efflux system, outer membrane lipoprotein, NodT 
Protein accessionYP_624327 
Protein GI107026816 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.621832 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTGC TTATTCTTCC CCTCGTCCTC GCGCTGTCGG CCTGCTCGCT GGCGCCCACG 
CTGGTCAAAC CGTCGATGCC GGTGCCGACG GCCTACACCG CCGCCGCTGC CGCCAATCCC
GACGCGAACG CCGCCGACCT CGGCTGGCGC ACGATGTTCG GCGACCGCCG CCTGCAACGC
CTGATCGAGC TCGCGCTCGA GCACAACCGC GACCTGCGCG TGGCCGCGCT GAACGTCGAG
GCCGCCGAAG CGCAGTACGG CATCCAGCGT GCCGCGCGCC TGCCGTCGAT CGGCGCCGGC
GCGAGCTTCA CGCGTCAGCG TACGTCGGAC GACACGCAGT CGAATCCGCC GCTGTTCGGC
GCGACGCAGA ACCAGTACGG CGTCAACGTC GGCATCAGCG CGTTCGAGAT CGACCTGTTC
GGCCGCGTGA AATCGATGTC GGATGCGGCG TTCGCGCGCT ACCTCGCGAC CGATCACGGC
CGCCGCGCGG TGCAGATCTC GCTCGTCGGC GGCGTGGCGG ACGCGTACTT CGCGGAACGC
CTCGCGCACG AGCAACGCCA GTTGTCCGAA CGCACGCTCG CCGACTGGCA GCAGTCGCTC
GATCTCGCAC GCCGCCTGAA GGAAGCGCAT CAGGCGAGCG GCGTCGACAT CGCGCAGGCC
GAAGGCCAGG TCGCGAGCGC GACGGCCGAT CTCGAAGCGC GCACGCGCGC CGTCGAGCAG
GCACGCAATG CATTGCGCCT GCTGATCGGC ACCGAGCTGC CGAAGGATCT GCCCGAGCCG
CTGCCGCTTC AGCAGCAACC GGTGATGACG CAACTGCCGG CCGGCTTGCC GTCCGAACTG
CTGTTCCGTC GCCCGGATAT CCAGCAGGCC GAACAAAATC TCGTCGCCGC GAATGCGGAC
ATCGGCGCCG CGCGCGCCGC GTTCTTCCCG CGCCTGTCGC TGACGTCGTC GATCGGCTTC
CTCAGCCCCG CGATGGGCAG CCTGTTCGAC GGCGGCCAGC GCGCATGGAG CTTCGCGCCG
CAGGTCACGG TGCCGATCTT CCAGGGCGGG CGGCTGCGTG CCGAGCTGCG TCTCGCGGAA
GTGCGCAAGT CCAGCGCGGT CGCCGAGTAC GAACGCGCGA TCCAGGCCGC GTTCCGCGAA
GTGGCCGACG GCATCGCCGG ACGTGAAACC TTCGGCCGTC AGATCGAAGC CCAAACGCGC
GTGGTCGGCT CGGCCGAACG CCGCGCCGAC CTGTCGAACC TGCGTTATCG CGCGGGTGTC
GAGGGGCGGC TGGAGCTGCT CGATTCGCAG CGGCAGCTCT ATGCGGCACG ACAGGCGCTG
CTCGATCTGC GCCGCAGCGA GCTCGGCAAT GCCGTCGCGC TGTACAAGGC GCTCGGCGGC
GGCCTGACGG ACCAGGACGT CGCACCGTCG AAGCGCGTGA TGCAGAACTG A
 
Protein sequence
MRLLILPLVL ALSACSLAPT LVKPSMPVPT AYTAAAAANP DANAADLGWR TMFGDRRLQR 
LIELALEHNR DLRVAALNVE AAEAQYGIQR AARLPSIGAG ASFTRQRTSD DTQSNPPLFG
ATQNQYGVNV GISAFEIDLF GRVKSMSDAA FARYLATDHG RRAVQISLVG GVADAYFAER
LAHEQRQLSE RTLADWQQSL DLARRLKEAH QASGVDIAQA EGQVASATAD LEARTRAVEQ
ARNALRLLIG TELPKDLPEP LPLQQQPVMT QLPAGLPSEL LFRRPDIQQA EQNLVAANAD
IGAARAAFFP RLSLTSSIGF LSPAMGSLFD GGQRAWSFAP QVTVPIFQGG RLRAELRLAE
VRKSSAVAEY ERAIQAAFRE VADGIAGRET FGRQIEAQTR VVGSAERRAD LSNLRYRAGV
EGRLELLDSQ RQLYAARQAL LDLRRSELGN AVALYKALGG GLTDQDVAPS KRVMQN