| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4470 |
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| Symbol | |
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| ID | 4094646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008061 |
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| Strand | + |
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| Start bp | 1711652 |
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| End bp | 1712812 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638017757 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_624325 |
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| Protein GI | 107026814 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.249353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAATC AGAAACGATG CTGCCACGGT GCCGTATGCG CGCTGGTGGC GGCAATGCTG
GCGGGGTGCG GACCGTCCGA GCAGCAGGCC GCCGCCCCGG CCACCCCGGT CGCGGCCATG
ACGGTGGCCG CCACGCGCGT CGACGTGACC GAAGACCTGC CGGGCCGCGT CGCGGCCGTG
CGGGTGGCCG AGATCCGGCC GCAGGTGAGC GGCATCGTGC AACGCCGGCT GTTCGAACAA
GGCACCGAAG TGCGCGCCGG CCAGCCGCTG TTCCAGATCA ATCCGGCGCC GTTCAAGGCG
GAGATGGACA CGGCTGCCGC CTCGCTGCAG CGTGCGCAGG CCGCGCTCGA GCGCGCGAAG
GTGCAGACGG CGCGCTTCAA GCCGCTCGTC GAGGCCGACG CGATCAGCCG CCAGGTGTAC
GACGACGCCG TATCGCAACG CGACCAGGCC GCGGCCGACG TCGCGCAGGC CCGCGCGACG
CTCGCGCGCC GCCAGCTCGA CCTGAAGTTC GCGACCGTGG AAGCGCCGAT CGCCGGCCGC
ATCGACCAGG CGCTCGTGAC CGAAGGCGCG CTGGTGTCGA GCAGCGACAG CCAGCCGATG
GCGCGCATCC AGCAGATCGA CCAGGTCTAC GTGGACGTGC GGCAACCGGC CGCCTCGCTC
GAGGCGCTGC GCGACGCGCT CGCGTCGCAG CCGCAAGCGT CGGACGGCAA CGGCCTGCCG
GTCGACGTGC TGCGCGACGA CGACACGCGT TACGACGTGC GCGGCCGCAT GCTGTTCTCG
GGCGTCAACG TCGATCCGGG CACCGGCGAC GTGCTGCTGC GCGTGCTGGT CGACAACCCG
AAACGCCAGT TGCTGCCGGG CATGTACGTG CGTGCCCGGA TTCCGCGCGC GCACTACGCC
AACGCCGTGA TGGTGCCGCA ACAGGCCATC GTGCGCGCCG GCGGCAAGCC GCAGGTGTGG
GTGCTCGACG CGAAAGGTAC CGCTCGTCTG AAAGCGGTCG AGGTCGGCGA ACTGACGAAC
CGCAGCTATC GGATCAAATC GGGCCTGCAG GCCGGTCAGA AGATCGTCGT CGAAGGCATG
GAGCGCCTGA CCGACGGCGC ACCGGCTGCC GCAACCGACT GGAAGTCGCC TGACGCGGTC
GCCACCGCGT CCGCGCACTG A
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| Protein sequence | MKNQKRCCHG AVCALVAAML AGCGPSEQQA AAPATPVAAM TVAATRVDVT EDLPGRVAAV
RVAEIRPQVS GIVQRRLFEQ GTEVRAGQPL FQINPAPFKA EMDTAAASLQ RAQAALERAK
VQTARFKPLV EADAISRQVY DDAVSQRDQA AADVAQARAT LARRQLDLKF ATVEAPIAGR
IDQALVTEGA LVSSSDSQPM ARIQQIDQVY VDVRQPAASL EALRDALASQ PQASDGNGLP
VDVLRDDDTR YDVRGRMLFS GVNVDPGTGD VLLRVLVDNP KRQLLPGMYV RARIPRAHYA
NAVMVPQQAI VRAGGKPQVW VLDAKGTARL KAVEVGELTN RSYRIKSGLQ AGQKIVVEGM
ERLTDGAPAA ATDWKSPDAV ATASAH
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