Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_4465 |
Symbol | |
ID | 4094641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 1704581 |
End bp | 1705705 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638017752 |
Product | secretion protein HlyD |
Protein accession | YP_624320 |
Protein GI | 107026809 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGACGC CACAAGACCC GCCACAGAAA GCAGATCGTC AGGAAAACAA AACAACGCCG CGCAACGGCA ACGGCGGAAC GAGGCGGCGC ATCCTGCTCG TGGTCGCCGT GCTCGCGGCC GTCGGCGGCG CGGTCTGGCT CGGCCGCTGG TGGACGGTCG GCCGCTTCAT CGAAAGCACC AACGACGCGT ACCTGCAGGC GGACAGCATG ACCGCCGCAC CGAAGGTCGC CGGCTACGTG ACCGACGTCT ACGTGCGCGA CAACCAGCCC GTGAAGGCCG GCGATCCGCT CGTGCGGCTC GATGTCCGCC AGTACCAGGT GGCGCTCGCG CAAGCGCAGG CGACCGTCGA CGCCCGCCGC GCCGATATCG CGCGCGCCGA AGCCGACATC AGCCAGCAGC GCGCGAATCT CGAGCAGGCC GACGCGCAGG CGAAGGTGTC GCGCATCAAC GCGCAGCACG CAAGCGACGA GTACACGCGC TATGCGCCGC TCGCGGCGAC CGGCGCCGAA ACGCACGAAC GCGTGGCCGA TCTGAAAAGC ACGCGCGACC AGGCGGCGGC GACACTCGCC GCGAACAACG CGTCGATCGC CGCCGCACGC ACGCAGATCG CGTCGTTCAC CGCGCAGCTC CAGCAGGCGC GCGCGCAGCT CGAGGCCGCG CAGGCCAGCG CCGCGCAGGC GCAGCTCGAC CTCGACAATA CGATCGTGCG CAGCACGCTC GCGGGCCGCG TCGGCGATCG CACGGTGCGC GTCGGGCAAT ACGTGCAGCC CGGCACGCGC CTGCTGACCG TCGTGCCGGT CGATTCGATC TACCTCGTCG CGAACTTCAA GGAAACGCAG ATCGGCAACA TGCGCATCGG CCAGCCCGTC GAGCTGCACG TCGATGCGCT GCCGGACGGC CCGCTGTCCG GCGTCGTCGA CAGCTTCGCG CCCGGCACCG GCGCGCAGTT CGCGCTGCTG CCGCCCGAGA ACGCGACCGG CAACTTCACG AAGATCGTCC AGCGCGTGCC GGTGCGCATC CGTCTCGCCG CGAACGCCCG CGCGCAACGC ATGCTGCTGC CCGGGCTGTC GGTGACGGTC GACGTCGATA CGCGCTCGGC CCGCGACGAG CAGCATCATG GCTGA
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Protein sequence | MSTPQDPPQK ADRQENKTTP RNGNGGTRRR ILLVVAVLAA VGGAVWLGRW WTVGRFIEST NDAYLQADSM TAAPKVAGYV TDVYVRDNQP VKAGDPLVRL DVRQYQVALA QAQATVDARR ADIARAEADI SQQRANLEQA DAQAKVSRIN AQHASDEYTR YAPLAATGAE THERVADLKS TRDQAAATLA ANNASIAAAR TQIASFTAQL QQARAQLEAA QASAAQAQLD LDNTIVRSTL AGRVGDRTVR VGQYVQPGTR LLTVVPVDSI YLVANFKETQ IGNMRIGQPV ELHVDALPDG PLSGVVDSFA PGTGAQFALL PPENATGNFT KIVQRVPVRI RLAANARAQR MLLPGLSVTV DVDTRSARDE QHHG
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