Gene Bcen_4397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4397 
Symbol 
ID4094769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp1628276 
End bp1629322 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content64% 
IMG OID638017684 
ProductGDP-mannose 4,6-dehydratase 
Protein accessionYP_624252 
Protein GI107026741 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1089] GDP-D-mannose dehydratase 
TIGRFAM ID[TIGR01472] GDP-mannose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAA CGCGTAAAAA GGCCATCATC ACCGGAATTT CGGGGCAAGA CGGTGCGTAC 
CTGACCAAAC TGCTGCTCGA CAAAGGCTAC GAAGTCACCG GCACCTACCG CCGCACCAGC
TCGGTGAACT TCTGGCGTAT CGCCGAGCTT GGCGTCGACA CGCACCCGAA CCTGACGCTC
GTCGAGCACG ACCTGACCGA CGCGGGCTCG AGCCTGCGCC TGCTCGAACG CACGCAGCCG
GACGAGCTCT ACAACCTGGC CGCGCAAAGC TTCGTCGGCG TGTCGTTCGA CCAGCCGGCG
ACGACCGCCG AAGTGACCGG CATCGGCCCG CTGAACCTGC TCGAGGCGAT TCGCGTCGTG
AGCCCGAAGA CGCGCTTCTA CCAGGCGTCG ACGTCCGAGA TGTTCGGCAA GGTACAGGCC
ATTCCGCAAA CGGAAACCAC CGCGTTCTAT CCGCGCAGCC CGTACGGCGT CGCGAAGCTG
TACGCGCACT GGATGACCGT GAACTATCGC GAATCGTATG GCCTGTTCGG CAGCAGCGGG
ATCCTGTTCA ACCACGAATC GCCGCTGCGC GGCCGCGAAT TCGTCACGCG CAAGATCACC
GACACGATCG CGAAGATCAA GCTGGGCAAG GCGACCAAGC TCGAGCTCGG CAATCTCGAC
GCGAAGCGCG ACTGGGGCTT CGCGCTCGAA TACGTCGAAG GCATGTGGCG CATGCTGCAG
GCCGACGAGC CCGACACCTA CGTGCTGGCG ACCAACCGCA CCGAAACCGT GCGCGACTTC
GTGCGGATGG CGTTCGCGGC GGCCGGCTAC CAGATCGAAT GGACCGGCAA GGGCGAGCAG
GAGCGCGGCC TCGATGCCGC GACCGGCAAC GTGCTCGTCG AAGTGAACCC GAAGTTCTAC
CGCCCGGCCG AAGTCGACCT GCTGATCGGC TGCGCGGACA AGGCGAAAAG CAAACTGGGC
TGGGCACCGA AGACGACGCT CGAACAACTT TGCCAGATGA TGGTCGAAGC GGATTTGACG
CGGAACCAAC ACCATGACAC GTTCTGA
 
Protein sequence
MSQTRKKAII TGISGQDGAY LTKLLLDKGY EVTGTYRRTS SVNFWRIAEL GVDTHPNLTL 
VEHDLTDAGS SLRLLERTQP DELYNLAAQS FVGVSFDQPA TTAEVTGIGP LNLLEAIRVV
SPKTRFYQAS TSEMFGKVQA IPQTETTAFY PRSPYGVAKL YAHWMTVNYR ESYGLFGSSG
ILFNHESPLR GREFVTRKIT DTIAKIKLGK ATKLELGNLD AKRDWGFALE YVEGMWRMLQ
ADEPDTYVLA TNRTETVRDF VRMAFAAAGY QIEWTGKGEQ ERGLDAATGN VLVEVNPKFY
RPAEVDLLIG CADKAKSKLG WAPKTTLEQL CQMMVEADLT RNQHHDTF