| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4382 |
|---|
| Symbol | |
|---|
| ID | 4094754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 1607419 |
|---|
| End bp | 1609887 |
|---|
| Gene Length | 2469 bp |
|---|
| Protein Length | 822 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638017670 |
|---|
| Product | formate dehydrogenase, alpha subunit, anaerobic |
|---|
| Protein accession | YP_624238 |
|---|
| Protein GI | 107026727 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAGGTC TTGCCCCGAC GTTTGGCCGT GGAGCGATGA CGAACCATTG GGTCGACATC
AAGAACGCGG ACGTGATTCT CGTGATGGGC GGCAATGCAG CCGAGGCCCA TCCGTGCGGT
TTCAAGTGGG TAACGGAGGC GAAGGCGCAC CGCAAGGCGC GGCTGATTGT CGTCGACCCG
CGCTTCACGC GTACGGCCTC GGTGGCCGAT TATTACGCGC CGATCCGCAC CGGCACCGAC
ATCGTCTTCC TGGGCGGCGT CATCAACTAT CTGCTGACGA ACGACAAGAT CCAGCATGAG
TACGTGAAGA ACTACACGGA CTTCTCGTTC ATCGTGCGCG AGGATTTCGC GTTCAACGAC
GGCATCTATT CCGGCTACGA CGCCGAGAAG CACGCGTACC CGGACAAATC GAGCTGGGAC
TACGAGCGCG GCGACGACGG CTTCGCGAAG GTCGATCCGA CACTGCAGCA TCCGCGTTGT
GTATACAACC TGCTGAAGCA GCACTACGCG CGCTATACGG CGGAGATGGT CCAGCAGGTC
TGCGGCACGC CGAAGGAGAA ATTCCTGAAG GTGTGCGAGA TGCTCGCGAC CACGGCCGTG
CCCGGCCGCG CCGGCACGGT GCTGTACGCG CTCGGCTGGA CCCACCACTC GATCGGCGCG
CAGATCATCC GCACCGGCGC GATGGTGCAG TTGCTGCTCG GCAACATCGG CATCGCCGGC
GGCGGGATGA ACGCGCTGCG CGGCCACTCG AACATCCAGG GGCTGACCGA CCTCGGGCTG
ATGTCGAACC TGCTGCCGGG CTACATGACG CTGCCGATGC AGGCCGAGCA GGATTTCGAC
GCGTACATCA AGAAGCGCGT GCAGGAACCG CTGCGGCCGA ACCAGCTCAG TTACTGGAAG
AACTACAAGG CGTTCCACGT CAGCTTCATG AAGTCGTGGT GGGGCGACGC GGCCACCGCG
GAGAACAACT GGGCCTACGA CTACCTGCCG AAGCTGGACA AGCAGTACGA CCTGCTGCAG
GCGATCGAGC TGATGAATGC CGGCAAGATG AACGGCTACA TCTGCCAGGG CTTCAACCCG
CTCGCGGCGG CGCCGTCGAA GGTGAAGACG GCGGCGGGTC TCGCGAAACT GAAATGGCTC
GTGATCATGG ATCCGCTCGC GACCGAGACG TCCGAGTTCT GGAAGCACCA CGGTGACTAC
AACGACGTCG ATGCGTCGAA GATCCAGACC GAGGTGTTCC GTCTGCCGAC CACCTGCTTC
GCGGAGGAAA ACGGCTCGCT CGTGAGTTCG AGCCGCGTGC TGCAGTGGCA CTGGAAGGGC
GCCGAGCCGC CGGGCGAAGC GAGGAGCGAC CTCGAGATCA TGTCGGGGCT GTTCCTGCGC
ATGCGCAAGC TGTACCAGAA GGACGGCGGC AAGTATCCGG ACCCGATCGT GAACCTGACC
TGGCCGTACG CGAACCCGGA GAGCCCGACG CCCGAGGAAC TGGCGATGGA GTTCAACGGG
AAAGCGCTCG CCGATCTGCC CGATCCGAAG GACCCGGCGA AGACGCTCGT GAAGAAGGGC
GAGCAGCTCG CCGCGTTCGC GCAACTGAAG GACGACGGCA CGACCGCGAG CGGCTGCTGG
ATCTTCTGCG GCGCGTGGAC CCAGGCCGGC AACCAGATGG GGCGGCGCGA CAACTCCGAC
CCGACCGGCA TCGGCCAGAC GCTGAACTGG GCGTGGGCGT GGCCGGCGAA CCGGCGCATC
CTGTACAACC GCGCGTCGTG CGACGTCGCG GGCAAGCCGT TCGACCCGAC CCGCAAGCTG
ATCGGCTGGA ACGGCAGCGC GTGGAAGGGC GCCGACGTGC CGGACTTCAA GGCGGACGAA
CCGCCCGAAA ACGGGATGGG GCCGTTCATC ATGAATCCGG AAGGCGTCGC GCGCTTCTTC
GCCCGCGCGG GGATGAACGA AGGTCCGTTC CCCGAGCACT ACGAGCCGTT CGAGACGCCG
CTCGGCGCGA ACCCGTTGCA CCCGAACAAC CCGCTGGCGC TGAACAACCC GGCCGCCCGC
GTGTTCCCGG ACGACCGCGC GTCGTTCGGC AAGGTGGCGG ACTTCCCGCA CGTGGCGACC
ACGTACCGGC TGACCGAGCA CTTCCACTAC TGGACCAAGC ATGCGCGGCT GAACGCGATC
ATCCAGCCCG AGCAATTCGT CGAGATCGGC GAAGACCTCG CGAAGGAAGT CGGCGTCGCG
CATGGCGAGC GCGTGAAGGT GTCGTCCAAG CGCGGCTACA TCATCGCGGT CGCCCTCGTG
ACGAAGCGGA TCAAGCCGCT GACGATCGAC GGCAAGAAGG TCCAGACGGT CGGCGTCCCG
TTGCACTGGG GCTTCAAGGG TCTGACGAAG CCCGGCTATC TCGCCAATAC CCTGACTCCG
TCCGTGGGTG ACGGCAACTC CTATACACCG GAATTCAAGT CGTTCCTGGT GAAGGTCGAA
AAGGCGTAA
|
|---|
| Protein sequence | MAGLAPTFGR GAMTNHWVDI KNADVILVMG GNAAEAHPCG FKWVTEAKAH RKARLIVVDP
RFTRTASVAD YYAPIRTGTD IVFLGGVINY LLTNDKIQHE YVKNYTDFSF IVREDFAFND
GIYSGYDAEK HAYPDKSSWD YERGDDGFAK VDPTLQHPRC VYNLLKQHYA RYTAEMVQQV
CGTPKEKFLK VCEMLATTAV PGRAGTVLYA LGWTHHSIGA QIIRTGAMVQ LLLGNIGIAG
GGMNALRGHS NIQGLTDLGL MSNLLPGYMT LPMQAEQDFD AYIKKRVQEP LRPNQLSYWK
NYKAFHVSFM KSWWGDAATA ENNWAYDYLP KLDKQYDLLQ AIELMNAGKM NGYICQGFNP
LAAAPSKVKT AAGLAKLKWL VIMDPLATET SEFWKHHGDY NDVDASKIQT EVFRLPTTCF
AEENGSLVSS SRVLQWHWKG AEPPGEARSD LEIMSGLFLR MRKLYQKDGG KYPDPIVNLT
WPYANPESPT PEELAMEFNG KALADLPDPK DPAKTLVKKG EQLAAFAQLK DDGTTASGCW
IFCGAWTQAG NQMGRRDNSD PTGIGQTLNW AWAWPANRRI LYNRASCDVA GKPFDPTRKL
IGWNGSAWKG ADVPDFKADE PPENGMGPFI MNPEGVARFF ARAGMNEGPF PEHYEPFETP
LGANPLHPNN PLALNNPAAR VFPDDRASFG KVADFPHVAT TYRLTEHFHY WTKHARLNAI
IQPEQFVEIG EDLAKEVGVA HGERVKVSSK RGYIIAVALV TKRIKPLTID GKKVQTVGVP
LHWGFKGLTK PGYLANTLTP SVGDGNSYTP EFKSFLVKVE KA
|
|---|
| |