Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_4314 |
Symbol | |
ID | 4094901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 1535279 |
End bp | 1535917 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638017605 |
Product | isochorismatase hydrolase |
Protein accession | YP_624173 |
Protein GI | 107026662 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.534869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGCG AACCGATTCG CGACCCCGCG AACGACCACC TGCTCACCCC GCAGAACGCC GCGTTCATCG TCATCGATTA CCAGCCGGTC CAGGTGAACT CCATCGCGTC GATGGATCGC CAGCTGCTGA TCAACAACAT CGTCGGCGCA TCGAAGGCGG CGGTCGCGTA CGACCTCCCG ATCGTCCACT CGACCGTCAA CGTGAAGACC GGGCTGAACA AGCCGCCGAT CCCGCAACTG CGCGCGGCGC TCGAAGGCTA TCCGACCTAC GACCGCACGA GCATCAACTC GTGGGAAGAC GTCGAGTTCC GCCAGGCCGT CGAGGCGACC GGCCGCAAGA AACTGATCAT GACCGCGCTG TGGACCGAGG CATGCCTGAC CTTCCCGGCG CTCGATGCGC TGAAGGCCGG CTACGAGGTG TACGTGGTCG TCGATGCGGT CGGCGGCACG TCGGTCGCCG CGCACGAAGC GGCGCTGCGC CGCATCGAGC AGGCCGGCGG CCAGATGATC AGCGTCGCGC AGCTGTTCTG CGAATTGCAG CGCGACTGGG CGCGCAGCGC CACCGTGCCG GCGTTCATCA ACCTGTTCAT CGAAACCGGC GGCACGGCCG GCATCCAGTT CTCGTACGAC AAGAGCTGA
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Protein sequence | MASEPIRDPA NDHLLTPQNA AFIVIDYQPV QVNSIASMDR QLLINNIVGA SKAAVAYDLP IVHSTVNVKT GLNKPPIPQL RAALEGYPTY DRTSINSWED VEFRQAVEAT GRKKLIMTAL WTEACLTFPA LDALKAGYEV YVVVDAVGGT SVAAHEAALR RIEQAGGQMI SVAQLFCELQ RDWARSATVP AFINLFIETG GTAGIQFSYD KS
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