| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4312 |
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| Symbol | |
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| ID | 4094899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008061 |
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| Strand | - |
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| Start bp | 1531745 |
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| End bp | 1533994 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638017603 |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_624171 |
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| Protein GI | 107026660 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.165307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATACCG AACCGCAAAG TTCTCGCTAC AGCCTCGGGC TCGCCGCGGA AGTACTCGCA
TCCGAGCAGA GCGTACTGAG GCTGATCACG CGCAACACGC CGCTGCCGGA ACTGTTGGTC
GAGGTTTGCC GGCGTGCCGA GGCTTTGCTC GGCGACGGCG CGTCCTGCAC GATCCTGCTG
CTCGATACGG ACGGCGTGCA CGTGCGCGTC GGCGCGGCGC CGTCGTTGCC CGCGCAGTAC
AGCGCGGCGA TCGACGGCGC GACGATCGGG CCCGCGGCCG GCTCGTGCGG CACGGCGATG
TACGAGCGCC GGATGGTCGC CGTCGAAGAC ATCGAAACCG ATCCATTGTG GGCCGACTAC
CGCGCCATCG CGTTGCCGCT GGGCTTGCGC GCGTGCTGGT CGGTGCCGTT CCTCGACGAG
GCGGGCGCCG TGCTCGGCGC GTTCGCCGTC TATCACCACC GGCCGTGCCG GCCGAGCGAC
GAGGAAACCG CGCTGTTGCG CGATATCGGC AACAGCGTCG GCCTCGCGGT GCACCAGGAC
CGGATCGCGC GACAACTCGC GCGCAGCGAG GAACATCACC GGCTCGTCGT CAACAGCCTG
AGCGAGGGCA TCCTCGTCAT ATCGCGCGAA GGCGTCGTGA TCGCGAGCAA TCCGAGCGCG
AACCGGATGA TGCGCGTGAA GGGCGAACTC GTCGGCCGCC GGCTGTCGAC GGTGATCCTG
CGCAAGCTGC GCGAGGACGG CACGCCGATC GACCCGCACG ACTGGCCGAG CCGGCGCGCG
CTCGAGACGG CCACGCCGAT GCTCGACTAT ACGGTCGGCT TCGGTCTCGC GGATGGCGAC
ATCATCTGGG TGCGCGGCAA CGCGGTGCCG ATCGTGAGGC CGGGCGAGAC GCAGGCCGAC
TCGGTGCTCG TGTCGTTCAA CGACATCGGC CCCGTGCGCG AAGCGCAGCA GCAGTTGCGC
TACATGGCGA CCCGCGACGC GCTGACGGGC CTCTACAACC GCCGCTGGCT CGGCGACCGC
ATGCGCGAGC TGTTCTGCGC GCACGACGCG GCAGCCGGGC CGGCGCGCGT CGCGATCCTG
TTCATCGATC TGGTCGGCTT CAAGAAGGTC AACGACACGG CCGGCCACGA CGCCGGCGAC
GCGCTGCTGC GCAGCGTCGC CGCGCGGCTC GCGGCCTGCG GGGAGGGCCG CTACGCGCTC
ACGCGCGTCG GTGGCGACGA GTTCGTGATC CTCGTCGACG ATTGCGACGA TCCCGATCGC
CTGTCGGTGC TCGCACGCGA GGTGATCGAG GCGATCGCGA AGCCGTTCGC GATCGCGAAC
AACGAGTACT GGCTCGGCGT ATCGATCGGC ATCAGCGTCG CGCCGCGCGA CGGCGACGAT
GCCGTGACGC TGATGCGCAA CGCCGATTCG GCGATGTACG ACGCGAAGCA GCGCGGCCGC
AACCACTTCA CGTTCTTCAC CGCGCAGCTC AACCTGCGGC TGCAGCGCCG CTTCGCGATC
GAGCAGTCGC TGCGGCGCGC GCTCGCGTCG GACCTGCTGC GGCTCGCGTA TCAACCCGTC
GTCGATGCGC GCAGCGGCCG CACGGTCGGC GCCGAGGCGC TGCTGCGCTG GACGAGCCCC
GAGCTCGGGC CGATGTCGCC GGCGGAATTC ATCCCGGTCG CGGAAGATAC CGGGCTGATC
GTCGCGATCG GCCAGTGGGT GCTCGAAACC GCGTGCCGGC AGGCGGCCGA GTGGCGCCGC
ACGATCGCGC CGGACCTGAT GCTGGCCGTC AACCTGTCGC CGCGGCAGTT TCACGAGGGG
CTCGTCGAAT CGGTCGGCCG CTGTCTCGCG CAGACGCGGC TCGACCCGTC GGCGCTCGAA
CTGGAGATCA CCGAAGGCGT GCTGATGAAC GACACGGACA CCGTGCTGCC GATGCTCGAA
GCGCTCACGG ACATGAACGT GCGGATCTCG GTCGACGATT TCGGCACCGG CTATTCGTCG
CTCGCGTACC TGAAGCGCTT TCCGCTGCAC AACCTGAAGG TCGACCGCTC GTTCGTGTCG
GGCGTGCCCG ATCATCACGA CTCGGTCGCG ATCACGCAGG CGGTCGTCGC GATGGCGCAT
TCGCTCGGGA TGAAGGTCAC GGCCGAAGGC GTCGAGACGC AGGCGCAGTC GTGGTTTCTG
CAGCAGATCG GCTGCGACAT GCAGCAGGGC TATCTGTTCA GCCGGCCGCT GGACGCGAGC
GATTACGCGC GCCGGCTCGG CGCCGCATGA
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| Protein sequence | MNTEPQSSRY SLGLAAEVLA SEQSVLRLIT RNTPLPELLV EVCRRAEALL GDGASCTILL
LDTDGVHVRV GAAPSLPAQY SAAIDGATIG PAAGSCGTAM YERRMVAVED IETDPLWADY
RAIALPLGLR ACWSVPFLDE AGAVLGAFAV YHHRPCRPSD EETALLRDIG NSVGLAVHQD
RIARQLARSE EHHRLVVNSL SEGILVISRE GVVIASNPSA NRMMRVKGEL VGRRLSTVIL
RKLREDGTPI DPHDWPSRRA LETATPMLDY TVGFGLADGD IIWVRGNAVP IVRPGETQAD
SVLVSFNDIG PVREAQQQLR YMATRDALTG LYNRRWLGDR MRELFCAHDA AAGPARVAIL
FIDLVGFKKV NDTAGHDAGD ALLRSVAARL AACGEGRYAL TRVGGDEFVI LVDDCDDPDR
LSVLAREVIE AIAKPFAIAN NEYWLGVSIG ISVAPRDGDD AVTLMRNADS AMYDAKQRGR
NHFTFFTAQL NLRLQRRFAI EQSLRRALAS DLLRLAYQPV VDARSGRTVG AEALLRWTSP
ELGPMSPAEF IPVAEDTGLI VAIGQWVLET ACRQAAEWRR TIAPDLMLAV NLSPRQFHEG
LVESVGRCLA QTRLDPSALE LEITEGVLMN DTDTVLPMLE ALTDMNVRIS VDDFGTGYSS
LAYLKRFPLH NLKVDRSFVS GVPDHHDSVA ITQAVVAMAH SLGMKVTAEG VETQAQSWFL
QQIGCDMQQG YLFSRPLDAS DYARRLGAA
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